KEGG   Rhodobacter sphaeroides ATCC 17029: Rsph17029_0008Help
Entry
Rsph17029_0008    CDS       T00484                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rsh  Rhodobacter sphaeroides ATCC 17029
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rsh00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rsph17029_0008
Enzymes [BR:rsh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rsph17029_0008
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rsph17029_0008
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:7314..8165
Genome map
AA seq 283 aa AA seqDB search
MPELPEVETVRRGLEPAMAGRLIAEARVNRADLRWPFPPRMAERLTGQRVLRLRRRSKYI
LADLSGGQSLLIHLGMSGRMLVSGAQLGEFFHGHPAPSRHDHVVLEMEGGARITFNDARR
FGAMDLVATEAAEAHPLLAVLGPEPLGNAFDGAYLAARLEGRRTPIKAALLDQRIVAGLG
NIYVCEVLFRAGLAPGRLAGSLSRAEAEGLVPLIREVLLEAIEAGGSSLRDYRQADGELG
YFQHTFRVYGREGLPCVTPGCSGTVGRIVQSGRSSFHCPLCQR
NT seq 852 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagcttccagaagtcgaaaccgtgcgccgggggctcgagcccgcgatggcgggc
aggctgatcgccgaggcgcgcgtgaaccgcgcggatctgcgctggccctttcccccgcgc
atggccgagcggctgacggggcagcgggttctgcggctgcggcggcggtcgaaatacatt
ctcgcggacctctcggggggccagtcgctgctgatccatctcggcatgtcggggcggatg
ctggtctcgggcgcgcagctgggagagttcttccacggccatcccgcgccctcgcgtcac
gatcatgtggtgctcgagatggagggaggcgcgcgcatcaccttcaacgatgcgcgccgc
ttcggggcgatggatctggtggcgacggaggcggccgaggcccatccgctgctcgccgtg
ctgggccccgagccgctcggcaacgccttcgacggcgcctatctcgcggcccggctcgaa
gggcggcggacgccgatcaaggcggccctcctcgaccagcggatcgtggcgggcctcggc
aacatctatgtctgcgaggtgctgttccgcgcaggcctggcgcccggccgcctggcgggc
agcctgagccgcgccgaggccgagggcctcgtgccgctgatccgcgaagtgctccttgag
gcgatcgaggcgggcggatcctcgttgcgcgattaccgtcaggcggatggcgagctcggc
tacttccagcacacgttcagggtgtacggacgcgagggtttgccctgcgtgacgcccggt
tgctccggcaccgtggggcggatcgtgcagtcgggacgctcgtccttccactgcccgctc
tgccagagatga

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