KEGG   Runella slithyformis: Runsl_1020Help
Entry
Runsl_1020        CDS       T01553                                 

Definition
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
Orthology
K01928  
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
rsi  Runella slithyformis
Pathway
Lysine biosynthesis
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:rsi00001]
 Metabolism
  Amino acid metabolism
   00300 Lysine biosynthesis
    Runsl_1020
  Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Runsl_1020
Enzymes [BR:rsi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Runsl_1020
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1198377..1199840)
Genome map
AA seq 487 aa AA seqDB search
MSKTLQNVLTGVPVIAVIGSADIEIKSIEFDSRRVAAGSLFVAQKGTQVDGHQFIRQVIE
MGAAAILCEDFPADLVDGITYIHVADSARTMGLMAANFYDNPSSKLKLVGVTGTNGKTST
VTLLFKLFRQLGYRVGLLSTVQNQIDDDIIPSTHTTPDSVRINELLAEMVRRGCTHCFME
VSSHAVVQERIAGLLFSGGIFTNITHDHLDFHKTFDNYIKAKKGFFDQLPKHAFALVNID
DRRGGVMVQNTAARKETYSLQTIATFKGKLLADSLFGLQMEIDGKEVWFKLIGKFNAYNL
LGVYGAALLLGEDDEQVLTALSEITPPPGRFEQVVSADAVVGIVDYAHTPDALQNVLETI
NELREGDRQVITVVGCGGNRDAAKRPEMARIAGELSSKVILTSDNPRNEEPATILEQMEV
GISPVDYKKMKVIEDRREAIRFAVSLAKPHDIILVAGKGHETYQEIKGVKHHFDDREELR
AAFEEKP
NT seq 1464 nt NT seq  +upstreamnt  +downstreamnt
atgtcaaagacgcttcaaaatgtattaacaggtgttccggttattgcagtgatcggaagt
gccgatattgaaattaaaagtatcgaatttgattcacgccgagtggcagccgggtcgttg
tttgtggctcaaaaaggcacccaagtggatggccatcaattcattcggcaagtgatcgaa
atgggcgctgccgcgattttgtgcgaagactttcctgctgacttagtggatgggatcacg
tacattcacgtagccgattccgcccgcacgatggggttaatggcggctaatttttacgat
aatccttcgtcaaaattaaaattggtcggtgtgacgggtaccaacggcaaaacctctacc
gtaacgctcttattcaaattgtttcgtcagttgggctaccgcgttgggttgctctctacg
gtgcagaaccaaatcgacgatgatattattccgtctacgcataccacgcccgactcggtc
aggatcaatgaattattggcggagatggtacggcggggctgtacgcactgttttatggaa
gtaagttcgcacgccgtagtgcaggagcgtattgcagggttgcttttttcgggagggatt
tttaccaacatcacccacgaccacctcgactttcacaaaacgtttgacaattacatcaaa
gccaaaaaaggcttctttgaccaactgcccaaacacgcttttgcgcttgtcaatatcgac
gaccgtcgcggcggggtaatggtgcagaatacggcagcgcgtaaagagacctattcgctc
caaaccattgccacctttaaaggcaagctgctggcagatagtctgtttggattacaaatg
gagatcgatggcaaagaagtttggtttaaattgatcggtaagttcaacgcgtacaattta
ttaggagtttacggcgcggctttgttgttgggtgaagacgatgagcaggtgctcacagcg
ctgtcggaaattacgccgccgcccggtcgttttgaacaggtagtgagtgccgatgccgtg
gtcggaatcgtggattatgctcacacgcccgatgccttgcaaaacgtattggaaaccatc
aatgaacttcgggaaggcgaccggcaggtgattactgtcgtgggctgcggcggcaaccgt
gacgcggccaagcgccccgaaatggcccgcattgcgggagaattgagcagcaaagtaatt
ttaacttccgataatccgcgcaacgaagaacccgcgacgattttggaacaaatggaggtt
ggtatctcacccgtggattataaaaaaatgaaagtcattgaagaccgccgcgaagccatt
cgttttgcggtatccctggccaaaccgcatgacatcatcttagtagcaggcaaaggccac
gaaacctatcaggaaatcaaaggtgtaaaacatcattttgacgatcgagaggagttaagg
gcggcgtttgaggagaagccatga

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