KEGG   Runella slithyformis: Runsl_1517Help
Entry
Runsl_1517        CDS       T01553                                 

Definition
DNA-formamidopyrimidine glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rsi  Runella slithyformis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rsi00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Runsl_1517
Enzymes [BR:rsi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Runsl_1517
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Runsl_1517
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1727586..1728401)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETYRRYFEATSLHQPIEAIEVEDRKLLTTDYATLTEMLIGQTFVSTKRVGKNL
FIYTDGGPTLHMHFGMTGDLEYYHSSLDRPRHARIVFVFASGFHLGFICPRKFERIGLIE
SVDAYLKKKKIAPDALDISVEELTYNLRKRKSFIKPVLLDQSTVAGIGNWIVDEVLFQAK
IHPETLSNRLTDEEIERIFSATRYVLETAIEHEANYGRFPQQFLIHSREWDVSPYEDAGR
HKRCPCDKVEIAQMQVGGRTTYYCPECQVLR
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgccagaacttcccgaagttgaaacctatcgacgctattttgaagctacctctcttcac
cagcccatcgaagccattgaggtagaagaccgaaaactcctcaccaccgattacgcgacg
cttaccgaaatgcttatcggtcagacttttgtcagtaccaaacgggttggaaaaaatctc
tttatttataccgacggcggccctacgctccacatgcactttggtatgacgggtgacctg
gaatactatcattcgtcgctcgaccgaccgcgccacgcgcggatcgtgttcgtttttgcc
tccggattccatttgggctttatctgcccgcgcaaatttgaacgcatcggattgatagaa
agcgtagacgcctacctcaaaaagaagaaaatcgctcccgacgcgcttgatataagtgta
gaagagttaacgtacaatctccggaaacgcaaaagttttatcaaacccgttttgctggac
caaagtacggtggcgggcattggcaactggattgtggatgaggtgctgtttcaggctaaa
atccaccccgaaacattgagtaatcggctaaccgacgaggaaatcgagcgtattttcagc
gccacgcgatatgtactcgaaacggccattgaacacgaagccaactacggacgttttccc
caacagttcctcattcattcccgcgaatgggacgtatctccttatgaagatgccgggcga
cacaaacgttgtccgtgcgataaagtggaaattgcacagatgcaggtaggaggtcgcact
acgtattattgccctgagtgtcaggttttaagataa

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