KEGG T01553: Runsl

Runella slithyformis: Runsl_1624

Entry

Runsl_1624 CDS T01553

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

rsi Runella slithyformis

Pathway

rsi00020	Citrate cycle (TCA cycle)
rsi00620	Pyruvate metabolism
rsi00630	Glyoxylate and dicarboxylate metabolism
rsi00680	Methane metabolism
rsi01100	Metabolic pathways
rsi01110	Biosynthesis of secondary metabolites
rsi01120	Microbial metabolism in diverse environments

Module

rsi_M00168

CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rsi00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:rsi00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:rsi00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:rsi00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C UDPG_MGDP_dh_N Glyco_hydro_4 NAD_binding_8 DAO DapB_N 3HCDH_N NAD_Gly3P_dh_N Pyr_redox_3 ThiF Malic_M

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1851259..1852188)

AA seq 309 aa
MKITVVGAGAVGATCADNIARRQLAQEVVLLDIKEGLSEGKALDMFQTATLNGFDTKITG
STNDYEKTKGSEVVVITSGIPRKPGMTREDLIGINAGIVKGVAENILKYSPKAIIIIVSN
PMDTMTYLAFKELGLPKKRIIGMGGILDSARFKTYLSLAMNVSPNDLHGMVIGGHGDTTM
IPLTRLATYNGIPVSRFLSEEKLQQVAADTMVGGATLTKLIGTSAWYAPGAAVATLVESI
VRDQKRIFPCSVYLNGEYGQKDICLGVPVVIGAGGWEKVVSLRLSESEKAAFAKSADAVR
TMNNVLSTI

NT seq 930 nt +upstreamnt +downstreamnt
atgaaaattaccgtagtaggagcaggggcagtaggcgcaacctgcgctgacaacatcgct
cgccgtcagttggcacaggaagtagtgttgcttgatatcaaagaaggcttatcggaagga
aaagcccttgatatgtttcaaaccgctactttgaacggatttgataccaaaatcaccggt
tcgaccaacgactacgaaaaaacgaaaggttcggaagtagtggttattacctccggaatt
ccccgtaagccgggcatgacgcgcgaagacctcatcgggatcaacgcaggtatcgtcaaa
ggagtggccgaaaatattctgaaatattctcccaaagccatcatcatcatcgtttccaac
cctatggataccatgacctatttggcgttcaaagaattgggattgcctaagaaacgcatc
atcggtatgggcggtattctggacagcgcacgtttcaaaacgtacctgtcgcttgccatg
aatgtatctcccaacgaccttcacggaatggtgatcggcggtcacggagatacgaccatg
attccgttgactcgtctggcaacgtataacggtattccggtaagccgtttcttatccgaa
gaaaaattgcagcaggtagccgccgacaccatggtaggtggtgccacattgaccaaattg
atcggtacatcagcctggtatgcaccgggtgcggccgtagcgacattggtggagagcatc
gttcgtgatcaaaaacgtattttcccctgctctgtgtatctgaacggcgaatacggacaa
aaagacatttgcctgggcgtaccggttgtgatcggtgccggcggttgggaaaaagtggta
agtctgcgtttgagcgagtcggagaaagcggcgtttgccaaatctgccgatgccgttcgt
acgatgaacaatgtgctttcgaccatttaa

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RSI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (35)   

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