KEGG T01553: Runsl

Runella slithyformis: Runsl_3004

Entry

Runsl_3004 CDS T01553

Definition

2-oxoglutarate dehydrogenase E2

Orthology

K00658

2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]

Organism

rsi Runella slithyformis

Pathway

rsi00020	Citrate cycle (TCA cycle)
rsi00310	Lysine degradation
rsi01100	Metabolic pathways
rsi01110	Biosynthesis of secondary metabolites
rsi01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rsi00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rsi00310]

SSDB

Motif

Pfam:

2-oxoacid_dh Biotin_lipoyl E3_binding GCV_H TraV

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

3500026..3501618

AA seq 530 aa
MSQIEIKVPTVGESITEVTIGSWVKKDGESVKRDEVICSLDSDKASFDVVSEADGVLQIK
AQEGDVLPIGGLICVVETSATATSAPAPAPVTSAPAQAPAPAASSAPAPAAAAKVVEMKV
PTVGESVTEVTISSWSKKDGDTVQLDEVLCELESDKATFELPAEAAGVLRIVAEAGATLP
IGAVICKIEVGAGSSAAPQPAAEAPAAAPPSNGQATAANASNDSYAAGHPSPAAAKILAE
KGIDPASVSGSGVGGRLTKEDAVAAQPKAAPTAAPAEQPKAPVAAPAASAPAPKAPDARG
QRRVKMTSLRKTIARRLVAVKNETAMLTTFNEVDMKPIMELRNKYKDKFKEKHGVGLGFM
SFFTRACAVALQEFPVVNAFIDGDEVVYNDFSDISIAVSTERGLVVPVIRNAEKMTFSQI
EKEIIRLAGLARDNKLTIDQMQGGTFTITNGGIFGSMLSTPIINAPQAAILGMHNIVERA
VVVNGEIVIRPIMYVALSYDHRTIDGRDSVSFLVRVKQLLEDPTRLLLEV

NT seq 1593 nt +upstreamnt +downstreamnt
atgtcacaaattgaaataaaagtccctaccgtcggcgaatcgatcactgaagtaaccatt
ggttcctgggtgaaaaaagacggtgaaagtgtcaaacgtgatgaagtaatatgtagctta
gattccgataaagcgtcatttgacgtggtttctgaagcggatggcgttttgcaaattaaa
gctcaggaaggtgatgtattaccgattggtggattgatatgtgtggttgaaacatcggcg
acagcaacttccgctcctgcacctgctccggtcacttctgctcccgcacaggcccctgcc
ccggcggcatcttcagcccctgctcccgctgctgcggctaaagtggtggaaatgaaagtg
ccgacagtgggtgaatctgtgacggaagtgaccatctcaagctggagtaaaaaagacgga
gataccgttcaactggacgaagtactctgcgaattggaatctgacaaagcaacgttcgaa
cttccggccgaagccgcgggtgtattgcgcattgtggccgaagcgggtgctacgcttccc
atcggcgcggtgatctgtaaaattgaagtaggggcaggaagttcggccgctcctcagccc
gccgctgaagcgcctgctgccgctcctccatccaacggacaggccactgcggccaatgcc
tccaatgacagctatgccgcaggacatccttcgccggcggcggctaaaattttagccgaa
aaaggaatcgaccccgcaagtgtatcgggctccggcgttggcggacggttaaccaaagaa
gatgcggtagccgctcaacccaaagcagccccaacggccgctcctgccgaacagcccaaa
gctccggtggccgccccggccgcaagcgctcctgctcccaaagcacctgatgcccgcgga
caacgccgtgtaaaaatgacctctttacgcaagaccatcgcccgtcgcctggtagccgtt
aagaatgaaacggccatgttgacgaccttcaacgaggtagacatgaagccgatcatggag
ttgcgcaataaatacaaagataaatttaaagaaaagcacggcgtcggcttgggctttatg
tcgttctttaccagagcctgcgcagtggctttgcaggaatttccggtagtcaatgctttt
attgacggcgacgaagtcgtttacaatgatttctccgatatttcgattgccgtttcgacc
gagcgcggattggtggtgcccgtgattcgtaatgccgagaaaatgaccttctctcaaatt
gagaaagagatcattcgtttggccggacttgcccgcgacaataagctgaccattgaccaa
atgcagggcggtacgtttaccatcaccaacggcggtattttcggctcgatgctttcgaca
cccatcatcaatgcccctcaggcggcgattttgggaatgcacaacatcgtagagcgtgcc
gtggtcgtaaacggagagattgtgattcgacccattatgtacgtagcgctcagttatgac
caccgcaccatcgacggtcgcgattcggtaagcttcctcgttagagtgaagcaattgctc
gaagaccccacccggttgttgctggaagtgtaa

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RSI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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