KEGG T01553: Runsl

Runella slithyformis: Runsl_3880

Entry

Runsl_3880 CDS T01553

Definition

beta-N-acetylhexosaminidase

Orthology

K12373

hexosaminidase [EC:3.2.1.52]

Organism

rsi Runella slithyformis

Pathway

rsi00511	Other glycan degradation
rsi00520	Amino sugar and nucleotide sugar metabolism
rsi01100	Metabolic pathways
rsi01110	Biosynthesis of secondary metabolites

Class

Metabolism; Carbohydrate metabolism; Amino sugar and nucleotide sugar metabolism [PATH:rsi00520]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:rsi00511]

SSDB

Motif

Pfam:

Glyco_hydro_20 Glyco_hydro_20b Glyco_hydro_67N Glycohydro_20b2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

4485597..4487261

AA seq 554 aa
MTFMKKRVFFLFSFLFWAISPVFSQNFYPILPKPLVLEPKEGTFILPPNPVIAVAGTDPV
LRRLAEELAHRIGTAAGKDTKVFAGNFRVRDGINFVTGKDAKLGEEGYLLEITPKRIVIT
AEQPKGFFYGLQSLLQLMPAEIYGSVRAENIPWSIPCCYIEDRPRYAYRGLMLDVGRHLY
PVSFIKKFIELIALHKMNVFHWHLTDDQGWRIEIKKYPKLTQIGSQRKETMWGHYSDQKY
DGKPYGGFYTQEEIREVVNFAREHFVTVIPEIEMPGHASAALAAYPEFGNNPDKLYQVGT
KWGVHEDVFAPREETFRFLEDILTEVIDLFPGQYIHIGGDECPKNQWKESRFCQELIRKE
GLRDEYGLQSYFIRRIDRFITSKGRKIIGWDEILEGGISPNATIMSWQGTEGGIAAAKQH
HEAIMTPGNFCYLDHYQADANTQPIAIGGLTTLEEAYSYNPTPAELTPEEAKHILGVQGN
VWTEYMPSSEYVEYMTFPRAIALAEVGWTLPSHKNIDDFKKRLNIHKKRLEYWNVNYFGA
PLNRTFIYQWPSKK

NT seq 1665 nt +upstreamnt +downstreamnt
atgacctttatgaaaaagcgcgttttctttttgttttcatttctgttttgggctatatcc
cccgttttcagccaaaatttctatcctatccttcccaagccgttagtgctcgaaccgaaa
gagggaacctttattctccctcccaatccggtcatcgccgttgcaggcacagatcctgta
ttgcgccgtttggctgaagaattggcccatcggattggcacggcagcaggaaaggatacc
aaagtatttgccggcaatttccgggtcagagacggtatcaattttgtgaccggtaaagac
gccaaactgggcgaagagggctatttgttggaaattacgccgaagcgaatcgttattacg
gcagagcagcccaaaggtttcttttatgggttgcaatcacttttacaactgatgcctgcg
gaaatctatggatccgtgcgcgctgaaaatatcccatggagcataccctgttgttacatt
gaagatcggccgcggtatgcctaccgcgggttaatgctcgatgttgggcgtcatttgtat
cccgtttcctttatcaaaaagttcattgagttgattgctcttcataaaatgaatgtcttt
cattggcatttgaccgatgatcaggggtggcggatagaaatcaaaaaataccctaaattg
acccaaatcggttcgcagcgaaaagagaccatgtggggacattacagcgaccaaaaatac
gacggtaagccctacggtggtttttatacgcaggaggaaatcagagaggtggtcaacttt
gcccgtgagcattttgtgaccgttattccggaaattgaaatgcccggacatgcgtcggca
gcattggcggcttatcccgaatttggcaacaaccccgataaactctatcaggtaggaaca
aagtggggcgttcatgaagatgtatttgcgcctcgagaagaaacgttccgctttttagaa
gatattctgactgaagtaatcgacctgtttccgggtcagtatattcatatcggaggggac
gaatgtcctaaaaatcaatggaaggaaagccgtttttgtcaggaattgatccggaaggaa
ggactcagggatgagtatgggctgcaaagttattttatccgccgtattgacagattcatt
acgtccaaagggcgcaaaataataggttgggatgaaatattggaaggcggcatttctccc
aatgctaccataatgagttggcaaggcaccgaaggggggattgccgcggcaaagcaacat
catgaggccatcatgactccaggcaatttttgttatttagaccattatcaggccgatgcc
aacactcagccgattgccatcggcggtctgacaacattggaagaggcgtactcatacaat
cccactcctgccgaacttacacctgaagaagctaagcatatccttggtgtgcaggggaat
gtctggacggaatacatgccttcatcagagtacgtagaatacatgacctttccgcgggcg
attgcattggctgaagtgggatggacactcccaagccataaaaatattgatgattttaaa
aaacggctgaacattcataagaaacggttggagtattggaatgtgaattacttcggggca
ccgctcaatcgtacatttatttaccaatggccatcaaaaaaatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RSI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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