KEGG   Runella slithyformis: Runsl_5517Help
Entry
Runsl_5517        CDS       T01553                                 

Definition
3-hydroxybutyryl-CoA epimerase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
rsi  Runella slithyformis
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Class
Metabolism; Overview; Carbon metabolism [PATH:rsi01200]
Metabolism; Overview; Fatty acid metabolism [PATH:rsi01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:rsi00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:rsi00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:rsi00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:rsi01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:rsi00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rsi00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rsi00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:rsi00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:rsi00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:rsi00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:rsi00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(6396931..6399099)
Genome map
AA seq 722 aa AA seqDB search
MTINCTTNNNIAILSWNMTGSPMNVLNDDSVPAFAEALEKAYSDAEVKGIIITSDKPEFV
AGADLKMILRNQGENPAEILKISVELNRLFRKIETNGKPVVAAINGTALGGGLEICLACH
YRVALDNPKTKLGLPEVKVGLLPGGGGTQRLPRMIGMQAALPLMLEGKEMTPKEALGLGI
VDAVAATREEMLEKAASWIAANPNPVKPWDEVNKKTGKIQAKDNYKVPNGAVLSPVGMQT
FTVGTAMMMDKSKGNYPAAQHIMSCVYEGLLVNIDRGIVIESRHFVQVATSKVAGNLIRT
MFLGLNEANKGASRPKDIPKTDVKKLGVLGAGMMGAGIAYVSAVAGIEVVLKDVSAEAAE
KGKDYARTLLKKAVERGKMDTLTAEGILDRIKPTADTADLQGSELIIEAVFENRDLKATV
TQEAEPMLAAGGVFGSNTSTLPITGLADASANPANFVGIHFFSPVDKMMLVELIVGKETS
DYALAVAVDFTRKIRKTPIVVNDSRGFYTSRCFGTYTSEGMELLKDGVSPVLIENAGKLA
GMPVGPLAVTDEVALDLVYKISAQAVKDGVLADTDTSYQIGKRFTEMGRLGKKAKAGFYD
YPEGGQKQLWAGLTELFPVVTVQPSLEEVKTRLLYRQALETVRCYEEGVIRTKLDADLGS
ILAWGFPPYTGGTLSFVDFVGINTFVTTLDRLADTYGERFRPTQKLREMAAEGVGFSAKK
QS
NT seq 2169 nt NT seq  +upstreamnt  +downstreamnt
atgactatcaactgcacaaccaataataacatagccatcctgagctggaacatgaccggc
tcacccatgaatgtacttaacgacgactccgtccctgcctttgcggaagcgctggaaaaa
gcgtacagcgatgcggaggtcaagggtattattatcacctccgataagcccgaatttgtg
gccggagcggatctgaagatgatcttacggaatcagggcgaaaatccggccgaaatattg
aagatatcggtggagctcaatcggctttttcgaaagatcgaaaccaatggtaaacccgtc
gtggcggccatcaacgggacggctttgggcggagggttggagatatgtttggcgtgccat
tatcgggtggcgctcgacaatcccaagacgaaactcggtctccccgaagtaaaagtgggc
ctgctgcccggtggcggcggtacgcagcgattgccccgaatgatcggaatgcaggcggct
ttgccgttgatgctggagggcaaagaaatgacccccaaagaagcattggggctgggtatc
gtggatgccgtggctgcaacgcgggaagagatgctggaaaaggccgcttcctggattgcc
gccaatcccaaccctgttaagccatgggatgaggtcaataagaaaacgggtaaaattcag
gccaaagacaattataaagtacccaatggcgcggtattgagcccggtcggaatgcagacc
tttacggtaggtacggccatgatgatggataagtccaaagggaattatcccgctgcgcaa
cacatcatgtcgtgtgtatatgaaggactgttggtcaatatcgaccgaggcattgtgatc
gaatcgcggcattttgtgcaggtagccacctccaaagtagcaggaaatctgattcggacc
atgtttctgggcctgaacgaagccaataaaggagcaagtcggcccaaagatattccgaaa
accgacgtaaagaagctgggtgttctgggggccggaatgatgggcgcaggcattgcgtac
gtgagtgccgtggcgggcattgaggtagtactgaaagatgtcagtgcggaagccgccgaa
aagggaaaagattacgcgcggacattgctgaaaaaagccgtcgaacgcgggaaaatggat
actctcaccgccgaaggtattttggatcgtatcaagccaacggccgataccgctgattta
cagggaagtgaactgatcattgaagcggtttttgaaaaccgtgatctcaaggctaccgtt
acccaagaagccgagccgatgctcgccgcaggcggggtgtttggctccaatacatccacc
ctgcccattaccggcttagccgacgcttcggcaaatcccgccaattttgtgggaatccac
ttcttttcacccgttgataaaatgatgttggtagagctgatcgtgggcaaagaaacgtcc
gattatgctttggctgtcgcggtagactttacccgtaagatccgaaaaacaccgatcgtg
gtcaatgactcgcggggattttatacatcccgctgttttgggacctatacttccgaagga
atggaattgctcaaagacggcgtgagtccggtattgatcgaaaacgccggaaaattggca
ggaatgcccgtcggaccgttggcagttaccgacgaagtggcgctggatctggtgtataag
atttcggcgcaggcagtaaaagacggtgtgttggccgataccgacacgagctatcaaatc
ggtaagcggtttacggaaatgggccgtttgggcaagaaagccaaagccggattttatgac
taccctgaaggcggtcaaaagcaattgtgggccggattaacggaattatttcccgtggta
acggtacagccttcgttggaagaagtgaaaacgcgtttgctgtaccgccaggcacttgaa
accgttcgctgctacgaagaaggggttatccgtactaagttggatgcggatctgggctct
atattggcgtggggctttccaccgtatacgggcggcacactctcttttgtggattttgtg
ggcatcaatacctttgtaactaccctcgaccgtttggcggatacctacggcgagcgtttt
cgccccacgcagaaactgcgcgaaatggcggcggaaggtgttgggttttcagcaaagaag
cagtcttag

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