KEGG   Cereibacter sphaeroides KD131: RSKD131_0152
Entry
RSKD131_0152      CDS       T00844                                 
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
rsk  Cereibacter sphaeroides KD131
Pathway
rsk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    RSKD131_0152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsk03400]
    RSKD131_0152
Enzymes [BR:rsk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     RSKD131_0152
DNA repair and recombination proteins [BR:rsk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     RSKD131_0152
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon RecJ_OB Apolipoprotein Gly_transporter
Other DBs
NCBI-ProteinID: ACM00012
UniProt: B9KM14
Position
1:complement(146842..148401)
AA seq 519 aa
MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEIGRVSRPASGHLYFDLKD
DRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMAM
LEKRRAALAAEGLFDAARKRPLPYLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWPV
AVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAES
RIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAET
IRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLRP
RLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFEALSARLAPAFARLIAETERATRR
DAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVRADGAVVTTK
AEAGTAAVLEIEFQDGRLSVGRGKTRKPKEEPPAQGSLL
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgtccgacctcttcgaagatcccgcccccagccgcaacacgccggaattcaccgtctcg
gagctgtcgggcgccgtgaagcgcgtcatcgagggcgagttcggcctcgtccgggtccgc
ggcgagatcgggcgcgtctcgcggcccgcctcggggcatctctatttcgacctgaaggac
gaccgcgccgtgatggcggcgatctgctggaaggggcaggccggccggctctccgtgcgt
cccgaggaggggatggaggtggtggccaccggccggatgaccaccttccccggccagtcg
aaatatcagatcatcgtcgaggacatggcccccgcaggcgcaggcgcactgatggccatg
ctcgagaagcgccgtgcggcgctggccgcggaggggctgttcgacgccgcccgcaagcgc
cccctcccctacctgccgcgggtgatcggcgtcgtgacctcgccgtcgggcgcggtgatc
cgcgacatcctccaccggctgcgcgaccgcttcccgagccatgtgctgatctggcccgtg
gcggtgcagggcgagaaatgcgcgcccgaggtggccgccgccatccgcggcttcaatgcc
ctgcccgaggggggcccgatcccgcgtcccgacctcctgatcgtcgcgcgcggcggcggc
agcctcgaggatctctggggcttcaacgaggagatcgtcgtccgggccgcggccgagagc
cggatcccgctgatctcggccgtgggccacgagaccgacaccacgctcatcgaccatgcc
gccgaccgccgtgcccccacccccaccgccgcggccgagatggcggtgcccgtgcggctc
gagctgctcgccggcctcgacggtcagggcgcgcggctctcgcgctgtgcggccgagacc
atccggcggcgcgaccagcgcctgcgcgatctcgcccgcgccctgccgcggctcgagagc
ctcgtggcgggaccgagccagcgcttcgacctctggtcgggccggctttcgggtgcgctc
ggccagagcgttgccgcccgccgggcccggctcgagccgctcggcgcgcatctgcggccg
cggctcctcgccgatctggtggcgcggcagaaggaccggctgggcgaccggacgcgcagc
ctcgagacctgcctcggacggcgcgccgagcgcgcccgggaccggttcgaagccctctcg
gcccgcctcgctccggccttcgcgcggctcatcgccgagaccgagcgcgcgacccggcgc
gacgcggccacgctcggcacgctcgcggcccggctcgacgcggcccccgaggcgcggctc
gcccgcctgtcggaccggctcgaggcgctcgaccgcctgcgccagacgctgggctaccgc
gagacgctgaagcgcggctatgcggtggtgcgggcggacggcgccgtggtcacgacgaag
gccgaagccggaaccgccgccgtgctcgagatcgagttccaggacggccgcctgtccgtg
ggccgcggcaagacccgcaagccaaaggaagagccgcccgcgcagggcagcctgctctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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