KEGG T01273: RPSI07

Ralstonia solanacearum PSI07: RPSI07_2483

Entry

RPSI07_2483       CDS       T01273

Symbol

gyrA

Name

(GenBank) DNA gyrase, subunit A, type II topoisomerase

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

rsl Ralstonia solanacearum PSI07

Brite

KEGG Orthology (KO) [BR:rsl00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rsl03032]
    RPSI07_2483 (gyrA)
   03400 DNA repair and recombination proteins [BR:rsl03400]
    RPSI07_2483 (gyrA)
Enzymes [BR:rsl01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     RPSI07_2483 (gyrA)
DNA replication proteins [BR:rsl03032]
Prokaryotic type
  DNA Topoisomerases
   RPSI07_2483 (gyrA)
DNA repair and recombination proteins [BR:rsl03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RPSI07_2483 (gyrA)

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C

Other DBs

NCBI-ProteinID:

CBJ51849

Position

complement(2601190..2603847)

AA seq 885 aa
MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHELLADIDKETVNFEPNYDGSETEPSILPARIPNLLINGSSGIAVGMAT
NIPPHNLREVVDGCLHLLRNPDATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRVEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE
VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPIAKQELMGRSWDSGLV
REMLSRAESDTAGGRAAYRPEGLLPVFGMQDDGLYKLSDTQAQEILQMRLQRLTGLEQDK
IVQEYREVMEQIADLLDILARPERITAIIVEELTLIRAEFGDERRSQIEHNATELDTEDL
ITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDYILCF
SNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPVKQFDEQHFVFMATSKG
TVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVRFDENDVRP
MGRQARGVRGMNLEEGQQVIAMLVAPAETAGEGEQAVAGSVLTATENGYGKRTPISEYTR
HGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREMGRATQGVT
LIAVGEGNKLSGLQRVVESDAEGEDAADSGAESDGDAPGADTAET

NT seq 2658 nt +upstreamnt +downstreamnt
atggatcaattcgccaaagagacactcccggtatcgctcgaagaagaaatgcgcagttcg
tacctcgcttacgccatgagcgtgatcgtgggtcgtgcgcttccggacgtgcgggatggt
ctcaaaccggtgcatcgccgcgtgctgtatgcgatgcacgagctgaacaacgactggaac
cgtccctacaagaaatcggcgcgtatcgtcggtgatgtgattggtaagtatcacccgcac
ggcgattccgccgtctatgacaccatcgtgcgaatggcgcaggatttctcgctgcgctat
atgctcgtcgacggccagggcaacttcggctcggttgacggcgacaacgcggcggcgatg
cgttacacggaaatccgcctgtcgaagatcgcccacgagctgctggccgacatcgacaag
gaaaccgtcaatttcgagccgaactacgacggcagcgaaaccgagccatccatcctgccg
gcacgcattccgaacttgctgatcaacggttcgtccgggatcgcggtcggtatggcgacc
aatatcccgccgcacaacctcagggaggtggtggacggctgcctgcacctgctgcgtaac
ccggatgcgacggtcgatgaactgatcgagctgatcccggcgccggatttcccgaccgcc
ggcattatctacggcatttcgggcgtgcgcgagggctatcgcaccggccgtggccgcgtg
gtgatgcgcgccaagacgcacttcgaggatatcgaccgcggccagcgccaggcgattatt
gtcgacgaactgccctatcaagttaacaagcgcacgctgctcgagcggatcgccgagctg
gtgaccgaaaagcgcgtcgagggcatttccgatatccgcgacgagtccgacaagtcaggc
atgcgcgtggtgatcgagctcaagcgtggcgaagtgccggaggtcgtgctcaacaacctc
tataagaatacgcagctgcaggacacgttcggcatgaacatggtggcgctggtcgacggc
cagcctcgcctgctgaacctgcgccagatgctggagtgcttcctgctgcaccgccgcgag
gtggtgacgcgtcgtacggtgttcgacctgcgcaaggcgcgcgagcgaggccacatcctc
gaaggcctggccgttgcgctggccaatatcgacgagtttatcgccatcatcaaggccgcg
ccgacgcccccgatcgccaagcaggagctgatgggtcgcagctgggattccggcctggtg
cgcgagatgttgtcgcgggccgagagcgacaccgccggcggccgtgccgcctatcgcccg
gaagggctgctgccggttttcggcatgcaagacgatggcctctacaagctgtccgacacg
caggcccaggaaatcctgcagatgcgcctgcaacgcctcacgggactggagcaggacaag
atcgtccaggaataccgcgaagtgatggagcagatcgccgacctgctggacatcctggca
cgtccggagcgcattactgcaatcatcgtcgaggaactcacgctgatccgcgcggaattc
ggcgacgagcgtcgctcgcagatcgagcacaatgcgaccgagttggatacggaagacctc
attacgccgcaagatctggtggtgacgctgtcccacagcggctatatgaagagccagccg
atctccgaataccgcgcgcagaagcgtgggggacgcggcaagcaggccgccgccaccaag
gaagatgactggatcgacacgctatttgtcgccaacacgcacgattacatcctctgcttc
tccaaccgcggccgtctctactggctcaaggtgtgggaagtgccgcaaggtagccgcaac
tcgcgcgggcgaccgatcgtcaacatgttcccgctgtcgcctggcgaaaagatcaatgtg
atcctgccggtcaagcagttcgacgagcaacacttcgtcttcatggccacctccaagggc
acggtcaagaaaacggcgctcaccgagttctccaacccgcgcaaggccggcatcatcgcc
gtggacctcgacgagggcgatttcctgatcggcgcggatatcaccgatggccagcatgac
gtgatgctgttctcggacgcaggcaaggcggtgcgcttcgacgagaacgatgtccgcccg
atgggccgccaggcgcgcggcgtgcggggcatgaacctggaggagggccagcaggtgatc
gccatgctggtggcgccggccgagacggcgggcgaaggtgagcaggcggtggcgggcagt
gtgctgactgcgaccgagaacggctatggcaagcgtacgccgatttccgagtacacccgc
cacggccgcggtaccaagggcatgatcgccatccagacctccgagcgcaacggcaaggtg
gtcgcggccgcgctggtggcgcccgaggacgagatcatgctgatcacgaccggcggtgtg
ctgatccggacccgcgtggatgagatccgcgagatggggcgtgccacccagggcgtcacg
ctgattgcggtgggcgagggtaacaaattgtccgggctgcagcgcgtggtggaatcggat
gccgagggcgaggatgccgccgacagcggggccgagtccgatggtgacgcgccgggcgcg
gataccgccgaaacataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system