KEGG T00071: RSc1251

Ralstonia pseudosolanacearum GMI1000: RSc1251

Entry

RSc1251           CDS       T00071

Symbol

hrpA

Name

(GenBank) probable atp-dependent rna helicase protein

K03578

ATP-dependent helicase HrpA [EC:5.6.2.6]

Organism

rso Ralstonia pseudosolanacearum GMI1000

Brite

KEGG Orthology (KO) [BR:rso00001]
09190 Not Included in Pathway or Brite
  09191 Unclassified: metabolism
   99980 Enzymes with EC numbers
    RSc1251 (hrpA)
Enzymes [BR:rso01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     RSc1251 (hrpA)

SSDB

Motif

Pfam:

DUF3418 OB_NTP_bind Helicase_C HA2_C HA2_N DEAD AAA_19 AAA_22 NACHT T2SSE nSTAND3 AAA_25 AAA_30

Other DBs

NCBI-ProteinID:

CAD14953

UniProt:

Q8XZZ4

Position

1327012..1331007

AA seq 1331 aa
MSDSHVSPPSAAPSQSSPNDASRPARQAGQADAGGRRPRRQKPTPEALAAALEARRARAN
AVPPISFPEALPVSARRDEIARAVAAHQVVIVSGETGSGKTTQLPKICLSIGRGIGAGGT
GLIGHTQPRRIAATSTAKRIAQEIGSPLGEHVGYQVRFNDTLSAGASVKLMTDGILLAET
QNDPLLRGYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAQRFAEHFA
GPKGPAPVIEVSGRLYPVEVRYRPVQRDEKDKERDLYDGIVDAVDELAREGAGDVLIFLP
GEREIREAAEALRKHHPAHTEILPLFARLSVQEQERVFRPSNARRIVLATNVAETSLTVP
GIRYVVDAGLARVKRYSYRNKVEQLQIEPVSQAAANQRAGRCGRVADGVCIRLYEEADFI
ARPRFTDPEILRSSLAAVILRMKALRLTDVEQFPFIEPPLGRAIADGYQLLQELGAVDDE
NALTPLGKQVARLPLDPRVARMILAGRDHQCLREMLIIASALSVQDPRDRPQELQQQADQ
AHRQFADEKSEFLGWVKLWKWFEEAVAHKKSNKQLQDQCRAHFLSHLRLREWRDVHSQLH
TTVAEQGWKLNESEPTYEQLHLALLTGLLGNIGVRIEEADGKGREYLGARGIKFFLWPGS
AIARKAGKWMVAGELIETSRLFGRTLARIEPEWVEKVGAHLLKVSWSDPHWEKKAGQVMA
FERGTLYGLPVYQQRRVHFGPMQPREARELFIRRALVDGEFETRLPFFAHNQRLVREIEN
LEHKSRRQDVLVDDELIHAFYDSQIPADIHNTVAFEGWYAEAAKASQKLLYLNRDDLMRH
EAAGITTDLFPKTLPIAGIDMGLTYHFEPGSPRDGVTLTVPLYALNQVPAQRAEWLVPGM
LKEKAHLLLKSLPQKLRRHCVPLPDYAAGFVSRVRLGDGDLLDRLIADVREQTGTPLKRA
DFKLETLPAHHFMNFKVIDEHGRQLDMGRNLAQLRAELGGRAQQTFQSIAAKDAAVAGAP
GDGAGARPGKGGKPDAPANPALYSGLTTWNFGELPELLEVRKGSQTLFGYPALVDGGDHC
DVEVFDDPAEAARIHRLGLRRLFALQLREPLKYLEKNIPGLSQMAIQFMTLGAQDELRNQ
ILDAALDRACLQDPLPADDAGFGARKDEGRTRLTLLAQEIARLAGAILAEYAQLPRKLQI
AKPFGAAYADIDAQLKALMHKRFIEATPYAQLAHFPRYLKGIAMRIDKLKADPTRDTQRM
QEMAPLFQQYQRAEKQLRVQGQGRAAAGDPRMEEFRWMLEELRIALFAQELRTPVPMSVK
RLQKVWESMQR

NT seq 3996 nt +upstreamnt +downstreamnt
atgtcagattcccacgtctcgccgccgtcggcggcaccctcccagtcctccccgaacgac
gccagccggcccgcgcgccaggcgggccaggccgacgccggcggccgtcgcccgcgccgg
cagaagccgacgccggaagcgctcgccgccgcgctggaagcccgccgcgcgcgcgccaac
gcggtgccgccgatcagctttcccgaagcgttgccggtctcggcccggcgcgacgagatc
gcccgggccgtcgccgcgcaccaggtggtgatcgtcagcggcgagaccggctcgggcaag
accacgcagttgcccaagatctgcctgtcgatcgggcgcggcatcggcgcgggcggcacc
gggctgatcggccatacgcagccgcggcgcatcgccgccacctccaccgccaagcgcatc
gcccaggagatcggctcgccgctgggcgagcacgtcggctaccaggtgcgcttcaacgac
acgctgtcggccggcgcctcggtcaagctgatgaccgacggtatcctgctggccgagacg
cagaacgatccgctgctgcgcggctacgacacgatcatcatcgacgaggcgcacgagcgc
agcctcaacatcgatttcctgctcggctacctcaagcagctgctgccgcgccggcccgac
ctgaaggtcatcatcacctcggccaccatcgacgcgcagcgctttgccgagcacttcgcc
gggcccaaggggcccgcgccggtcatcgaagtgagcggccggctgtatccggtcgaagtg
cgctaccgccccgtgcagcgtgacgagaaggacaaggagcgcgacctctacgacggcatc
gtcgacgcggtcgacgagctcgcgcgcgaaggcgccggcgatgtgctgatcttcctgccg
ggcgaacgcgagatccgcgaggcggccgaggcgctgcgcaagcaccacccggcgcacacc
gagatcctgccgctgttcgcgcggctgtcggtgcaggagcaggagcgggtgttccgcccg
tccaacgcgcgccgcatcgtgctggccaccaacgtggccgagacctcgctgacggtgccg
ggcatccgctacgtggtcgatgcggggctggcgcgcgtcaagcgctattcgtaccgcaac
aaggtcgagcagctgcagatcgagccggtttcgcaggccgccgccaaccagcgcgcgggc
cgctgcggccgggtggccgacggcgtgtgcatccgcctgtatgaagaggcggacttcatc
gcgcgcccgcgctttaccgatccggaaatcctgcgttcgtcgctggccgccgtcattctg
cgcatgaaggcactgcggctgacggatgtggagcagttccccttcatcgagccgccgctg
ggccgtgcgattgccgatggctaccagctcctgcaggagctgggcgcggtcgacgatgag
aacgcgctgacgccgctgggcaagcaggtggcccgcctgccgctggacccgcgcgtggcg
cgcatgatcctggccggccgcgaccaccagtgcctgcgcgagatgctcatcatcgccagc
gccctgtccgtgcaagacccgcgcgaccgcccgcaggaactgcagcagcaggccgaccag
gcgcaccgtcagtttgccgacgagaaatccgaattcctcggctgggtcaagctgtggaag
tggtttgaagaggcggtcgcgcacaagaagtcgaacaagcagttgcaggaccagtgccgc
gcgcacttcctgtcgcacctgcggctgcgcgagtggcgcgacgtgcattcgcaactgcac
accacggtggccgagcaaggctggaagctcaacgaatccgagccgacctacgaacagctg
cacctggcgttgctgacgggcctgctcggcaacatcggcgtgcgcatcgaagaagccgat
ggcaaggggcgcgaatacctcggcgcgcgcggcatcaagttcttcctgtggccgggttcg
gccatcgcgcgcaaggccggcaagtggatggtggccggcgagctgatcgaaaccagccgc
ctgttcggccgcacgctggcgcgcatcgagcctgaatgggtggagaaggtcggcgcgcac
ctgttgaaggtgtcgtggagcgacccgcactgggaaaagaaggccggccaggtgatggcc
ttcgagcgcggcacgctctacggcctgccggtctaccagcagcgccgcgtgcatttcggg
ccgatgcagcccagggaggcgcgcgagctgttcatccgccgcgcgctggtcgacggcgag
ttcgagacgcgcctgccgttcttcgcgcacaaccagcgtctggtgcgcgagatcgagaac
ctcgagcacaagtcgcgccgccaggacgtgctggtcgacgacgaactgatccacgccttc
tacgacagccagatcccggccgacatccacaacaccgtcgccttcgagggctggtacgcc
gaggccgccaaggccagccagaagctgctgtacctgaaccgcgacgacctgatgcgccac
gaggcggccggcatcaccaccgacctgttccccaagacgctgccgatcgccggcatcgac
atgggcctcacgtatcacttcgagcccggcagcccgcgcgacggcgtgacgctgacggtg
ccgctctacgcgctgaaccaggtgcccgcgcagcgcgccgaatggctggtgcccggcatg
ctcaaggagaaggcgcacctgctgctcaagagcctgccgcagaagctgcgccgccactgc
gtgccgctgcccgactatgccgccggctttgtgtcgcgcgtaaggctgggtgacggcgac
ctgctcgaccgcctgatcgccgacgtgcgcgagcagaccggcacgccgctcaagcgcgcc
gacttcaagctggaaacgctgcccgcgcatcacttcatgaacttcaaggtgattgacgag
cacggccgccagctcgacatgggccgcaacctggcccagctgcgcgccgaactcggcggg
cgggcgcagcagaccttccagtcgatcgccgccaaggacgcggcggtggccggcgcgccg
ggcgatggcgccggcgccaggccgggcaagggcggcaagccggacgccccggccaacccc
gcgctgtactcgggcctgaccacctggaacttcggcgagctgcccgaactgctggaagtc
cgcaagggcagccagacgctgttcggctacccggcgctggtcgacggcggcgaccactgc
gacgtggaagtcttcgacgacccggccgaggccgcgcgcatccaccgcctgggtttgcgc
cgtctgtttgcgctgcagctgcgcgagccgctgaagtacctggaaaagaatattcctggc
ctgtcgcagatggcgatccagttcatgaccctgggcgcgcaggacgaactgcgcaaccag
atcctggacgccgcgctcgaccgcgcctgcctgcaggacccgctacccgccgacgacgcc
ggcttcggcgcccgcaaggacgagggccgcacgcgcctgacgctgctggcgcaggagatc
gcccggctggccggcgcgatcctggccgaatacgcccagctgccgcgcaagctgcagatc
gccaaaccgttcggcgccgcgtatgccgacatcgatgcgcaactgaaggcgctgatgcac
aagcgcttcatcgaggcgacgccctacgcccagctcgcgcacttcccgcgctacctgaag
ggcatcgccatgcgcatcgacaagctcaaggccgatccgacgcgcgacacccagcgcatg
caggagatggcgccgctgttccagcagtaccagcgcgccgagaagcagctgcgtgtgcag
gggcagggtcgagctgcggcgggtgacccgcgcatggaggaattccgctggatgctggag
gagctgcgcatcgcgctgttcgcgcaggagttgcgcacgccggtgccgatgtcggtgaag
cggctgcagaaagtgtgggagtcgatgcagcgatag

All links

Ontology (1)   
   KEGG BRITE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (42)   

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