KEGG   Ralstonia pseudosolanacearum GMI1000: RSc2742
Entry
RSc2742           CDS       T00071                                 
Symbol
holA
Name
(GenBank) probable dna polymerase III (delta subunit) protein
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
rso  Ralstonia pseudosolanacearum GMI1000
Pathway
rso03030  DNA replication
rso03430  Mismatch repair
rso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RSc2742 (holA)
   03430 Mismatch repair
    RSc2742 (holA)
   03440 Homologous recombination
    RSc2742 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rso03032]
    RSc2742 (holA)
   03400 DNA repair and recombination proteins [BR:rso03400]
    RSc2742 (holA)
Enzymes [BR:rso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RSc2742 (holA)
DNA replication proteins [BR:rso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RSc2742 (holA)
DNA repair and recombination proteins [BR:rso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RSc2742 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: CAD16449
UniProt: Q8XVT5
Position
complement(2951677..2952753)
AA seq 358 aa
MQLRLDALEGHLKQAGSKGLAPLYVVHGDEHLLVLEAVDALRQAARAQGFSEREVMTVER
GFSWSRVTEAQQSMSLFGDRKIVELRIPSGKPGKDGGEALRALAAGTPSGPAADTVTLIT
LPRLDFATAKSAWFAALEGAGVSIKVDSVDRAKLPGWIGERLARQQQRVEAGESGRRALQ
FIADRVEGNLLAAHQEIQKLGLLHPPGVLSFDAVHDAVLNVARYDVFKLSEAMLSGDVPR
LVRMLEGLRGEGEATVLVLWTLTEEIRVLSKIASGAAQGKPMASMLRELRVWGPRERLVP
QAVQRLSQPELEAALQMAARLDRQVKGLREPSLPAEPWDGLLQLAMRIARPHSLPVPV
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgcaactgcggctcgatgcgctggaaggccacctgaagcaggccgggtccaagggcctg
gcgccgctgtacgtggtgcacggcgacgagcacctgctcgtgctggaggccgtcgatgcg
ctgcgccaggcggcgcgcgcgcagggcttctccgagcgcgaggtgatgacggtcgagcgc
ggcttttcgtggtcgcgcgtgacggaggcgcagcagtcgatgtcgctgttcggcgaccgc
aagatcgttgagctgcggattccttccggcaagcccggcaaggacggcggcgaggcgctg
cgcgcgctggcggcgggcacgccatcggggccggctgccgacaccgtcacgctgatcacg
ttgccgcggctggactttgccaccgccaagtcggcgtggttcgcggcgctggagggcgcg
ggcgtgtcgatcaaggtcgattcggtggaccgcgccaagctgcccggctggatcggcgag
cgcttggcccgccagcagcagcgcgtggaagcgggcgagtccggccgccgcgcgctgcag
ttcatcgccgaccgcgtggaaggcaacttgctggccgcgcaccaggaaatccagaagctc
ggcctgctgcatccgcccggcgtgctgtccttcgatgccgtgcacgacgcggtgctcaac
gtggcgcgctacgacgtcttcaagctgtccgaggcgatgctgtcgggcgacgtgccgcgc
ctggtgcgcatgctcgaaggcctgcgcggcgagggcgaagccaccgtgctggtgctgtgg
acgctgaccgaggaaattcgcgtattatcgaaaatcgcctcgggcgcggcccagggcaag
ccgatggcctcgatgctgcgcgagctgcgggtctggggcccacgcgagcggctggtgccg
caggcggtgcagcggctgtcgcagccagagctggaggcggcgctgcagatggcggccagg
ctggaccggcaggtcaagggcctgcgcgagccgtcgctgcccgccgagccatgggacggc
ctgctgcagctggccatgcgcatcgcgcggccgcacagcctgccggttcccgtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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