KEGG   Rummeliibacillus stabekisii: ATY39_15230
Entry
ATY39_15230       CDS       T04369                                 
Name
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
rst  Rummeliibacillus stabekisii
Pathway
rst03030  DNA replication
rst03430  Mismatch repair
rst03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rst00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ATY39_15230
   03430 Mismatch repair
    ATY39_15230
   03440 Homologous recombination
    ATY39_15230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rst03032]
    ATY39_15230
   03400 DNA repair and recombination proteins [BR:rst03400]
    ATY39_15230
Enzymes [BR:rst01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ATY39_15230
DNA replication proteins [BR:rst03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     ATY39_15230
DNA repair and recombination proteins [BR:rst03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     ATY39_15230
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA RuvB_N AAA_22 AAA_5 AAA_30 AAA_assoc_2 AAA_24 AAA_14 AAA_16 Mg_chelatase AAA_19 TIP49 Rad17 AAA_7 AAA_18 DUF815 AAA_11 nSTAND3 PIF1 RNA_helicase TT_ORF1
Other DBs
NCBI-ProteinID: AMX00648
UniProt: A0A143HFY1
Position
3029723..3031510
AA seq 595 aa
MSYQAFYRVYRPQSFKEMSGQSHIKRTLQNALLAGKTTHAYLFSGPRGTGKTSTAKIFAK
TINCEHAPTAEPCNECATCKSITNGSHPDVIEFDAASNSSVDEIRDIIEKVRFAPASARY
KVYIIDEVHMLSTSAFNALLKTLEEPPPHVVFILATTEPHKIPATIISRCQRFDFKRLST
TDILERMKLVLEEIDLPYDEQALKVIAKSAAGGMRDALSMLDQVVSFSAEKLTLEDSLFV
TGSISQDIFYTLAENLAKGDVANVLDVLEQLMDEGKDAVRLSEDLITFFRDLLLIQSAPD
LSDLLELATTDEKFLTLANEFTMDTLYSYIDVLSKTQQEMRLSLHAKVYLETALLKMSQI
NHKRPKQAYVTSSSENMDVEMPQLVEMQSKIAALESLVQQLQVGGNTVQPQPQGSGQAKR
PRAKANTGFNVPVGRIQEVLKVATKQDIQSIKSAWAESLNRLPKSQSALLEDAEPVAASA
SAFVLKFKYDIHCQMAVENQELISHFSQHLAEMTGNYYQVICVPEENWQRIRADFIQHHN
SDKVEDNETDKETSTGEQKAEVVQSILEDEQLLSEDPLVVEAEKLFGKDFITIEE
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtcctaccaagccttttatcgtgtctatcgtccgcagtcttttaaggaaatgtcagga
cagtcacatataaagcgtacattgcaaaatgccctcctagctggcaaaacaacgcatgct
tatcttttctcaggtcctcgtggtacagggaaaacgagtacagctaaaatattcgctaag
acaatcaattgtgagcatgcaccaactgccgagccctgcaatgaatgcgcgacatgcaaa
agcattacaaatggttcgcacccagatgttattgagtttgatgccgcttctaattcaagc
gtagatgaaataagagacataatcgaaaaagttcgttttgcaccagccagcgctcgttat
aaagtctatataatcgatgaagtgcatatgctttcaaccagtgcctttaatgcgttatta
aaaacattggaagagccaccgccacatgttgtatttatattagctacgactgaaccccat
aagatacctgctactataatttcgaggtgccaacgatttgacttcaagcgtctatctacg
acagatatattagagcgtatgaaattagtattagaagaaatagaccttccttatgacgaa
caagcattaaaggtgattgccaaatcggctgccggtggaatgcgagatgcactcagtatg
ctagatcaagttgttagttttagtgctgaaaaactcacattggaagactccctttttgtt
acgggatctattagccaggatattttttatacacttgcagaaaatctagctaaaggtgat
gtagcaaacgtattagatgtgcttgagcaactgatggatgaaggtaaagatgcagtccgt
ctttctgaagacttaatcaccttctttagagacttattattgattcagtctgctcctgac
ctttcagatttgctagaattagctacaacagatgagaaattcctcaccctagcaaatgaa
tttacaatggacacgctatacagttatattgatgtcctgtcaaaaacacaacaagaaatg
cgtctttcattgcatgcaaaggtataccttgaaacagcattattaaaaatgtcgcagatc
aatcataaaaggccaaaacaagcctatgtgacatcaagttcagagaatatggatgtagag
atgccacagcttgttgaaatgcaatcaaaaattgctgccttagaatctttggttcagcaa
ctgcaggttggaggaaacaccgttcagcctcaaccacaaggaagtgggcaggcgaagcgc
ccacgtgcaaaagcaaatactggttttaatgttccagtagggagaattcaagaagtatta
aaagtggcgacaaaacaagatatccaatcgattaaaagtgcctgggcagaatcccttaat
cgattacctaaatcacaatcggcattattggaagacgcggaacctgtagcagcatcagcc
agtgcttttgtgttaaaattcaaatatgatattcactgccaaatggcagtcgaaaatcaa
gagctaatttcacatttcagccagcacttagcggagatgactgggaactattatcaagtt
atctgtgtcccagaagagaactggcaaagaatacgtgctgattttatccagcatcataat
tcggataaagtggaagataatgaaaccgataaagaaacttcaactggcgaacaaaaagct
gaggttgtacaatcaatattagaagatgaacagctgttatccgaagaccctttagtggta
gaagcggaaaagctgttcggcaaagatttcattactattgaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (45)   

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