KEGG   Rhodovulum sulfidophilum: NHU_00942
Entry
NHU_00942         CDS       T04143                                 
Symbol
pbpA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
rsu  Rhodovulum sulfidophilum
Pathway
rsu00550  Peptidoglycan biosynthesis
rsu01100  Metabolic pathways
rsu01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:rsu00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    NHU_00942 (pbpA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    NHU_00942 (pbpA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rsu01011]
    NHU_00942 (pbpA)
Enzymes [BR:rsu01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     NHU_00942 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:rsu01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   NHU_00942 (pbpA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: BAQ68108
UniProt: A0A0D6AYW6
Position
complement(986755..988701)
AA seq 648 aa
MKRSQREAEESNRRIGRRTLIMGGAQALFAGVLALRMRQLQVTQAAEFRLLAEENRINIR
LIPPARGILYDRQGHVIAENDQNYRIVIVREDAGAPEQALARLTRLVQLDDETVERALKE
IRRHSPFVPVTIADRMRWEEVASVAVNAPVLPGIAPEVGQSRHYPMGPDFAHIVGYVGPV
SDYDLSKLEDPDPLLQIPRFQIGKTGVEAKEEELLRGKAGTRRIEVNAAGRVIRELDRID
GQPGSDLQLTIDAGLQNFMQARLGEESAAAVVLDLQHGDVLGIASSPSFDPNKFVQGISV
ADYRALTETPFRPLSNKAVQGAYPPGSTFKLVTALAALEAGVITPDETVWCPGFLKLGDR
RFHCWRRGGHGHVNLTESLQQSCDVYYYDIGQRVGIDNIAAMARKLGLGVHHDLPLSAVG
EGLAPDRAWKRARYGQDWQVGDTLNASIGQGYVLATPLQLAVMSARIATGRAVTPRLLRS
IDGVEQPSGAGAPLDIKPVNLERIRKGMDAVVNSRRGTGRRSRVVADGMAMAGKTGTSQV
RNITAAERAAGVFRNEDLPWERRDHALFVAFAPVEAPRVAIAVVVEHGGGGSAVAAPIAR
DLTLRALYGRVPPGDAYPESDRWEAERRLRDLPLRDPGSRSSGGRGRA
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgaagcggtcgcaacgggaagccgaggaaagcaaccgccggatcggccgccgcacgctg
atcatgggcggcgcgcaggcgctctttgccggggtgctggcgctccggatgcggcagctg
caggtgacccaggcggccgaattccgtctgctggccgaagagaaccggatcaacatccgc
ctgatcccgcccgcccgcggcatcctctacgaccgccagggccatgtgatcgccgaaaac
gaccagaactaccggatcgtcatcgtgcgcgaggatgcgggcgccccggaacaggcgctg
gcgcggctgacccgtctggtgcagctcgacgacgaaacggtcgaacgcgcgctgaaggag
atccgccgccacagccccttcgtgccggtgaccatcgccgaccggatgcgctgggaagag
gtggcaagcgtcgcggtgaacgcgccggtcctgcccggcatcgcccccgaggtcgggcag
tcgcggcattatccgatggggccggatttcgcccatatcgtgggctatgtgggcccggtt
tccgattacgacctgtcgaagctcgaggatcccgacccgctgctgcagatcccgcgcttc
cagatcggcaagaccggggtcgaggccaaggaagaagagctgttgcgcggcaaggccggg
acccgccggatcgaggtcaatgccgcgggccgggtgatccgcgagctcgaccggatcgac
ggccagcccggatcggacctgcaactgaccatcgatgccgggctgcagaacttcatgcag
gcccgccttggcgaggaaagcgcggcggccgtggtcctcgacctgcagcatggcgacgtg
ctgggcatcgcctcttcgccgagcttcgatcccaacaagttcgtccagggcatttcggtc
gccgattaccgggcgctgaccgagacgcccttccggccgctctcgaacaaggcggtgcag
ggcgcctacccgcccggctcgaccttcaagctggtgaccgcgctggcggcgctggaggcc
ggggtcatcacccctgacgaaaccgtctggtgcccgggcttcctgaaactcggcgacagg
cggttccattgctggcgccggggcgggcatggtcatgtcaacctgaccgaaagcctgcag
caatcctgcgacgtctattactacgacatcggccagcgcgtcgggatcgacaatatcgcg
gcgatggcccgcaagctggggctgggcgtgcatcacgacctgccgctgtcggccgttggc
gaaggcctggcgccggaccgcgcctggaaacgcgcacgctacgggcaggactggcaggtc
ggcgacacgctgaacgcctcgatcggtcagggctatgtcctggcgacgccgctgcagctg
gcggtgatgtccgcgcggatcgccaccggacgcgcggtcacaccgcggctcctgcgctcg
atcgacggggtcgaacagccctcgggcgcgggcgcgccgctcgacatcaagccggtcaac
ctcgagcgcatccgcaagggcatggacgcggtggtcaattcgcggcgcggcaccggccgg
cggtcgcgggtggtggccgacggcatggcgatggcgggcaagaccggcaccagccaggtg
cgcaacatcaccgccgccgaacgcgccgcgggggtcttccgcaacgaggacctgccctgg
gagcggcgcgatcatgcgctgttcgtggcctttgcgccggtcgaggcgcccagggtcgcg
atcgcggtcgtggtcgagcatggcggcggcggctcggccgtggccgcgcccatcgcccgc
gatcttacgctgcgcgcgctttatggcagggtgccgccgggcgatgcctatcccgaaagc
gaccgctgggaggccgagcggcggctgcgcgacctgcctctgcgcgaccccggatcgcgg
tcttcgggcggaaggggccgcgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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