KEGG T01544: Rta

Ramlibacter tataouinensis: Rta_04410

Entry

Rta_04410 CDS T01544

Definition

hybrid histidine kinase

Orthology

K13924

two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]

Organism

rta Ramlibacter tataouinensis

Pathway

rta02020	Two-component system
rta02030	Bacterial chemotaxis

Class

Environmental Information Processing; Signal transduction; Two-component system [PATH:rta02020]
Cellular Processes; Cell motility; Bacterial chemotaxis [PATH:rta02030]

SSDB

Motif

Pfam:

CheB_methylest CheR PAS_9 PAS_4 PAS PAS_10 HATPase_c Response_reg HisKA PAS_3 PAS_8 CheR_N PAS_7 CENP-F_leu_zip Spc7 HATPase_c_3 Sec8_exocyst HATPase_c_2 AAA_13 IFT57 IncA Methyltransf_18 DUF4201 Sec20 Golgin_A5 Methyltransf_25 COG2 Exonuc_VII_L DUF2450 TBPIP Mnd1 DUF342 OmpH TPR_MLP1_2 Prominin LMP GAS Methyltransf_12 zf-C4H2 COG5 LMBR1 MCPsignal ALIX_LYPXL_bnd WEMBL

Other DBs

NCBI-GI:

337278060

NCBI-GeneID:

10831005

UniProt:

F5Y608

Position

448837..453462

AA seq 1541 aa
MSAQPEAEQHQEPPTDGLDDAVPSQGYRLIPLVGLGGSAGAIPVLQQFFRAVPAEAGLAF
VVVIHLNAEHESTLAELLQRTTRMRVTQLTERQRVEPNTVYVIPPGKSIKVGDGFLRLDS
LQPERRHVAVDLFFRSLADAHGPHSAAVVLSGADGDGAIGIKRIKERGGLTIAQDPQECE
HGGMPRSAIATGMVDWVLPVADMAPRLLAYFRLEKALRLPAEEAPPAAAAPPGGPGPAGD
GEEAPLRDVLAFLRTRTGRDFSAYKRATIVRRIARRMQVNGTDNLHGYLNCLRTRPGEAG
ALLQDLLISVTNFFRDADCFGALEAHLGELFRDRAPGDTLRVWVPACATGEEAYSLAILL
CERARQLDAPPVIQIFATDLDEEAIRVGREAVYPATIEADVPQEHLRRYFLKEHQGYRVR
REVRELVLFAQHDVLRDSPFSRLDLVSCRNLLIYLNREAQQRVFQTFHFALQPHGRLFLG
ASESIEEAGGLFSVIDKKNRIFGLRPAPRLSPPTPHGPSSLALALDLPPALAEAPAIPGR
GLQPVVAPVRAHRAGEAGRGTSWGEVHFKLLEVLAPPSVLVDAEHEILHLSPQAGRFLQY
GGGEPSRNLMRAVHPSLRIELRAALFQAAQTQQTAEVVATPVELAGQPMEVQLRVSPTLE
LAPDLFMVMFSARPVDAARAPALAGPERAGADPVAHHLDRELERLKSHLRDTVEQYEAST
EELKASNEELQAMNEELRSATEELETSREELQSINEELSTVNYELKAKVEELAHANSDIH
NLMDATEIATVFLDRELRVMRYTPSAVRIFNLIPTDLGRPLADLATRLEYRELGDDARRV
LERLIPVEREVGLADGNWFLTRLLPYRTLDDRIAGVVLSFIDITERKKAEEVRLWLSAVV
NSTSDGIVSFAPDLTVLSWNSGCERIFGWSAQEMIGQSLALTAPSQEERLRANVRLLEEG
RDLHFETLRWRKDGTEIQVALSISPIRDPDGRVIGGTAIVRDVTETRRAQEQLRASEERL
RLIVENARDFAIFSLDPERRVTAWNSGAQRLLGYSEEEVLGRSGDVIFTEGDRAAGAAEA
EARKALAEGRAEDERPHRRKDGSTFWASGVAMRMDDAAGTAVGFVKILRDQTEQREAREA
LVRSQGELVRALEDNLRARRELEAADAAKDRFLAVLSHELRNPLASISSASEMLAAPDTS
GDDLRRAADVVRRQADAMRELLDDLLDVSRLRLGRLTLKRQPVLLADVVAAALESTRPLV
RAAGHRLTVRLPQEPLWLQADPLRLGQLLSNLIGNAAKYTPHGGKIELSAEADPEQVVVT
VADNGIGIDPSEIERMFDLFTQAHDERGRPNDGLGIGLALSRSIAELHGGWLRAASAGRG
QGSRFQLGLPLHRPGAAEGAAAAAAPASSPPAAEPGGGELVLIADDNVDAAWALAKLMEL
SGFQVVAVHSGEEALRLAQARRPAIMLVDIGMPDLSGHEVARRVRAGAGGQDVMLVAVTG
WGQEGDQRDSLAAGFDAHLTKPLNMGRLKSLLAELRRRRAR

NT seq 4626 nt +upstreamnt +downstreamnt
atgagcgcacaacccgaagcagaacagcaccaagaacccccgacggatggcctggacgac
gcggtgcccagccaggggtatcgcctgattccgctggtggggctgggcggctcggccggg
gcgatccccgtgctgcagcagttcttccgcgctgtgccggccgaggccggcctggccttc
gtggtcgtcatccacctcaatgcggagcacgaaagcacgctggccgagctgctgcagcgc
accactcgcatgcgcgtcacgcagctgaccgagcgccagcgcgtggagcccaacaccgtc
tacgtcatcccgcccggcaagtccatcaaggtgggcgacggcttcctgcggctggacagc
ctgcagcccgagcgccggcacgtggcggtggacctgttcttccgctcgctggccgacgcg
cacgggccgcactcggcggcggtggtgctgtcgggcgcggacggcgacggcgccatcggc
atcaagcggatcaaggagcgcggcggcctgaccatcgcgcaggacccgcaggagtgcgag
catggcggcatgccgcgcagcgcgatcgccaccggcatggtcgactgggtgctgccggtg
gccgacatggcgccgcggctgctggcctacttccgcctcgagaaggccctgcggctgccg
gccgaggaggcgcccccggcggcggccgcgccgcccgggggcccggggccggcgggcgac
ggcgaggaggcgcccctgcgcgacgtgctggccttcctgcgcacccgcaccggccgcgac
ttctcggcctacaagcgggccaccatcgtgcggcgcatcgcccgccgcatgcaggtcaac
ggcaccgacaacctgcacggctacctgaactgcctgcgcacccggcccggggaggcgggc
gcgctgctgcaggacctgctgatcagcgtcaccaacttcttccgcgacgccgactgcttc
ggcgcgctggaggcgcacctgggcgagctgttccgtgacagggcgccgggcgacacgctg
cgcgtctgggtgccggcctgcgccaccggcgaggaggcctattcgctggccatcctgctg
tgcgagcgggcccggcagctcgacgcgccgccggtgatccagatcttcgccaccgacctg
gacgaggaggccatccgggtggggcgcgaggcggtgtatccggccaccatcgaggccgac
gtgccgcaggagcacctgcgccgctacttcctcaaggagcaccagggctaccgggtgcgc
cgcgaggtgcgcgagctggtgctgttcgcccagcacgacgtgctcagggactcgccgttc
tcgcggctggacctggtctcctgccgcaacctgctgatctacctgaaccgcgaggcgcag
cagcgcgtgttccagaccttccacttcgccctgcagccccacgggcggctgttcctgggc
gcctcggagtcgatcgaggaggccggcggcctgttctcggtcatcgacaagaagaaccgc
atcttcggcctgcggccggcaccgcgcctgagcccgccgacgccgcacggcccgagctcg
ctggcgctggcgctggacctgccgccggcgctggccgaggcgcccgcgatccccggccgc
ggcctgcagccggtggtcgcgccggtgcgtgcgcaccgggccggcgaggccggccgcggc
acctcctggggcgaggtgcacttcaagctgctggaggtgctggcgccgccctcggtgctg
gtggacgcggagcacgagatcctgcacctgtcgccacaggccggccgcttcctgcagtac
ggcggcggcgaacccagccgcaacctgatgcgcgccgtgcaccccagcctgcgcatcgag
ctgcgcgcggccctgttccaggcggcccagacgcagcagaccgccgaggtggtcgccacc
ccggtggagctcgcgggccagccgatggaggtgcagctgcgcgtgagccccacgctcgag
ctggcgccggacctgttcatggtgatgttctcggcccgtccggtggatgccgcgcgcgct
cccgccctggcggggccggagcgcgccggggccgacccggtggcccaccacctcgaccgc
gaactggagcggctgaaatcgcacctgcgcgacacggtggagcagtacgaggcctccacc
gaggagctcaaggccagcaacgaggaactgcaggccatgaacgaggagctgcgctcggcc
accgaggaactggagaccagccgcgaggagctgcagtccatcaacgaggagctctccacg
gtcaactacgagctcaaggccaaggtggaggagctggcgcacgccaacagcgacatccac
aacctgatggacgcgaccgagatcgccacggtgttcctggaccgcgagctgcgcgtgatg
cgctacacgccgtcggccgtgcgcatcttcaacctgatccccaccgacctgggccggccg
ctggccgacctggcgacccggctggagtaccgcgagctgggcgacgacgcccggcgggtg
ctggagcggctgatcccggtcgagcgcgaggtcgggctggcggacggcaactggttcctc
acgcgcctgctgccctaccgcaccctggacgaccgcatcgccggcgtggtgctgtccttc
atcgacatcaccgagcgcaagaaggccgaggaggtgcggctgtggctgtcggccgtggtc
aactcgaccagcgacggcatcgtcagcttcgcgccggatctcaccgtgctgagctggaac
tcgggctgcgagcgcatcttcggctggagcgcgcaggagatgatcgggcagtcgctggcc
ctgacggcgccaagccaggaggagcggctgcgcgccaacgtgcgcctgctggaggagggc
cgggacctccatttcgaaaccctgcgctggcgcaaggacggcaccgagatccaggtggcc
ctgtccatctcgcccatccgcgaccccgacggccgggtgatcggcggcaccgccatcgtg
cgcgacgtcaccgagacgcggcgcgcgcaggagcagctgcgcgccagcgaggagcggctg
cgcctgatcgtggagaacgcgcgcgacttcgccatcttctcgctcgacccggagcgccgc
gtcacggcctggaacagcggcgcccagcgcctgctcggctactccgaggaggaggtgctc
ggccgcagcggcgacgtgatcttcaccgagggcgaccgggccgccggcgctgcggaagcc
gaggcgcgcaaggcgctggccgagggccgggccgaggacgagcggccgcaccggcgcaag
gacggcagcaccttctgggccagcggcgtggccatgcgcatggacgacgcggcgggcacg
gcggtgggcttcgtcaagatcctgcgcgaccagaccgagcagcgcgaagcgcgcgaggcg
ctggtgcgcagccagggcgagctggtgcgcgcgctggaggacaacctgcgcgcgcggcgc
gagctggaggcggccgacgcggccaaggaccgcttcctggccgtgctgtcgcacgagctg
cgcaacccgctggcttccatcagcagcgcctcggagatgctggccgcgccggatacgtcc
ggcgacgacctgcgccgcgccgccgacgtggtgcggcgccaggccgacgccatgcgcgag
ctgctggacgacctgctggacgtttcgcggctgcgcctggggcggctgacgctcaagcgc
cagccggtcctgctggcggacgtggtggccgccgcgctggagagcacgcggccgctggtg
cgcgccgccggccaccggctgacggtgcgcctgccgcaggagccgctgtggctgcaggcc
gacccgctgcggctggggcagctgctgtccaacctgatcggcaacgcggccaagtacacg
ccccacggcgggaagatcgagctgtcggccgaggccgacccggagcaggtggtcgtcacc
gtggccgacaacggcatcgggatagatccgtccgagatcgagcgcatgttcgacctgttc
acgcaggcccatgacgagcgcggccggcccaacgacggcctgggcatcgggctggcgctg
tcgcgcagcatcgccgaactgcacggcggctggctgcgcgccgcctcggccggccgcggc
cagggcagccggttccagctgggcctgcccctgcaccggcccggcgcggccgaaggcgcg
gcagcggccgcggcgccggcttcctccccgccggcggcggagccgggtggcggggaactg
gtgctgatcgccgacgacaacgtcgacgccgcctgggcgctggccaagctgatggagctg
tcgggcttccaggtggtggcggtgcacagcggcgaagaggcgctgcggctggcccaggcc
cggcggccggccatcatgctggtggacatcggcatgcccgacctcagcggccacgaagtg
gcgcggcgcgtgcgcgccggcgcgggcggccaggacgtgatgctggtggcggtgacgggc
tggggccaggaaggcgaccagcgcgactccctggccgccggcttcgacgcccaccttacc
aagccgctgaacatgggccggctcaagtcgctgctggctgagctgcggcggcgccgcgcg
cgctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (44)   
   Pfam (44)   
All databases (55)   

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