KEGG T01544: Rta

Ramlibacter tataouinensis: Rta_06880

Entry

Rta_06880 CDS T01544

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rta Ramlibacter tataouinensis

Pathway

rta03410	Base excision repair
rta03420	Nucleotide excision repair
rta03430	Mismatch repair
rta03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rta03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rta03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rta03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rta03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C

Other DBs

NCBI-GI:

337278316

NCBI-GeneID:

10831266

UniProt:

F5XX07

Position

complement(723243..724319)

AA seq 358 aa
MAASTFPVPPIEPMLAKIAEELPQGEGFLFEPKWDGFRALVFRTAEGALIQSRDGKPLNR
YFPELEKMLAEQLPRGCVVDGEVVVAGPGGLDFDALQQRIHPAASRIARLAQETPAGFVA
FDLLAAGGKDITALPQQERRTRLERLLGQARPPLHLTPVTTDRAQAQDWLQRFEGAGLDG
VMAKPADAPYQPGKRAMFKIKHARTADCVVAGFRWYKDKQEAVGSLLLGLYDDAGVLQHV
GITSSFTLAVRKQLLEELGPLREHALENHPWRGWAEAEVGDAERMPGAKSRWSGGKDLSW
EPLRPERVCEVRYDHLQGRRFRHATTFLRWRDDKPPQACRYDQLETSTPFELAQVFGA

NT seq 1077 nt +upstreamnt +downstreamnt
atggccgccagcaccttccccgtcccgcccatcgagcccatgctggccaagatcgcggaa
gagctgccgcagggcgagggtttcctgttcgagcccaagtgggacggcttccgggccctg
gtgttccgcacggccgagggcgcgctgatccagagccgcgacggcaagccgctcaaccgc
tacttccccgagctggagaaaatgctggccgagcagctgccgcgcggctgcgtggtcgac
ggcgaggtggtggtcgccggcccgggcggcctggacttcgacgcgctccagcagcgcatc
catcccgccgcctcgcgcatcgcccggctggcccaggaaacgccggccggcttcgtcgcc
ttcgacctgctggcggccggcggcaaggacatcacggccctgccccagcaggagcgccgc
acccggctggagcggctgctcggccaagcccgcccgcccctgcacctcacgcccgtgacc
accgaccgcgcccaggcccaggactggctgcagcgcttcgagggcgccggcctggacggc
gtgatggccaagccggcagacgcgccctaccaacccggcaagcgcgccatgttcaagatc
aaacacgcccgcacggccgactgcgtggtggcgggcttccgctggtacaaggacaagcag
gaggccgtgggctccctgctgctgggcctgtacgacgatgccggcgtgctgcagcacgtg
ggcatcacctcctccttcaccctggccgtgcgcaagcagctgctggaagagctggggccg
ctgcgcgagcacgcgttggagaatcacccttggcgcggctgggccgaggccgaggtcggc
gatgccgaacgcatgcccggcgcgaagagccgctggtccggcggcaaggacctgagctgg
gaaccgctgcgacccgagcgggtgtgcgaggtccggtacgaccacctgcagggccggcgc
ttccgccacgccaccaccttcctgcgctggcgggacgacaagccgccgcaggcctgccgc
tacgaccagctcgagaccagcacgcccttcgagctggcccaggtgttcggcgcctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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