KEGG T01544: Rta

Ramlibacter tataouinensis: Rta_33220

Entry

Rta_33220         CDS       T01544

Symbol

mutY

Name

(GenBank) Candidate A/G-specific adenine glycosylase protein

K03575

A/G-specific adenine glycosylase [EC:3.2.2.31]

Organism

rta Ramlibacter tataouinensis

Pathway

rta03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:rta00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Rta_33220 (mutY)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rta03400]
    Rta_33220 (mutY)
Enzymes [BR:rta01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.31  adenine glycosylase
     Rta_33220 (mutY)
DNA repair and recombination proteins [BR:rta03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Rta_33220 (mutY)
Prokaryotic type
     Rta_33220 (mutY)

SSDB

Motif

Pfam:

HhH-GPD NUDIX_4 HHH HHH_5 EndIII_4Fe-2S HHH_8

Other DBs

NCBI-ProteinID:

AEG94435

UniProt:

F5XYR8

Position

complement(3537720..3538730)

AA seq 336 aa
MVRWQASHGRSHLPWQNTRDPYRVWLSEVMLQQTQVATVLGYYQRFLDRFPDVTALAAAP
LDDVLALWSGLGYYSRARNLHRCAQVVAAGHGGRFPRTARELAELPGIGRSTAAAIAAFC
FGERAAILDGNVKRVLTRVLAFGEDLAQQGGERRLWTQAEALLPQACEPMPAYTQGLMDL
GATVCLARDPSCLICPVRGLCRAAAQGDPQRYPVRSRKLKRTAQTLWLLHARGADGRVWL
ERRPDAGIWAGLYCLPAFGSREALEAAVPPENRRLLEDGEPFVHVLTHKDLHLHPVTARL
PQGSAPSAGEGSWFEAAQWPGLGLPAPIRKLLATAA

NT seq 1011 nt +upstreamnt +downstreamnt
gtggtgcgctggcaggccagccacgggcgcagccacctgccctggcagaacacgcgcgac
ccctaccgcgtgtggctgtccgaggtcatgctgcagcagacgcaggtggccaccgtgctg
ggctactaccagcgcttcctcgaccgcttccccgacgtgaccgcgctggccgccgcgccg
ctggacgatgtgctggcgttgtggagcggcctgggctactacagccgcgcgcgcaacctg
caccgctgcgcccaggtggtggccgcgggccatggcgggcggttcccgcgcactgcccgg
gagctggccgagctgcccggcatcggccgttccacggcggccgccatcgccgccttctgc
ttcggcgagcgtgcggccatcctggacggcaacgtcaagcgcgtgctcacccgggtgctg
gccttcggcgaggacctggcgcagcagggcggcgagcgccggctgtggacgcaggccgag
gcgctgctgccgcaagcctgcgaacccatgcccgcctacacccagggcctgatggacctg
ggcgccaccgtgtgcctggcccgcgacccgagctgcctgatctgcccggtgcgcgggctg
tgccgggctgccgcccagggcgatccgcagcgctacccggtcaggagccgcaagctcaag
cgcacggcgcagaccctgtggctgctgcacgcgcgcggcgccgacggccgggtgtggctg
gagcgccggcccgatgccggtatctgggccggcctctactgcctgccggccttcggctcg
cgcgaggcgctggaagccgcggtgccgcccgagaacagaaggctgctggaggacggggaa
cccttcgtccatgtgctgacgcacaaggacctgcacctgcatcccgtgacggcccgcctg
ccgcagggcagcgcaccgagcgcgggggagggcagctggttcgaagcggcgcagtggccc
ggcctgggactgcccgcgcccatccgcaagctgctggcgaccgccgcctag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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