KEGG   Ramlibacter tataouinensis: Rta_33240Help
Entry
Rta_33240         CDS       T01544                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rta  Ramlibacter tataouinensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rta00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rta_33240 (mutM)
Enzymes [BR:rta01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rta_33240 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rta_33240 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(3540777..3541589)
Genome map
AA seq 270 aa AA seqDB search
MPELPEVEVTRLSFADRIAGGRILSARIGKPLRWALGCDPALLAGRTVRGVRRRGKYLLL
DLDEGLLLLHLGMSGSLSFRASQPEPGPHDHFDLATTRGVLRLNDPRRFGAVVFAPGEQA
PEAAKLLGRLGVEPLGEGFEAAAFHAGLRRRNAPIKQVLLAGDVVVGVGNIYASEALFLA
GIRPTTRASRLGRERALRLHAAVRQVLAQAVSRGGSTLRDFSNADGQAGYFQLEAMVYDR
AGQPCRICATPVRSIRQGQRATFYCPSCQT
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgccagaagtcgaggtcacgcgcctgagttttgccgaccgcatcgccggc
ggacgcatcctgtcggcccgcataggcaaaccattgcgctgggccctgggctgcgacccg
gcgctgctggccgggcgcacggtgcgcggcgtgcgccgccgcggcaagtacctgctgctg
gatctggacgaaggcctgctgctgctgcacctgggcatgtccggcagcctgagtttccgg
gccagccagcccgagccgggcccgcacgatcatttcgacctcgccaccacccgcggcgtg
ctgcgcctgaacgacccgcgccgcttcggcgccgtggtgttcgcgcccggcgagcaggcc
cccgaggcggccaagctgctggggcggctgggggtcgagccgctgggcgagggattcgaa
gccgcggccttccatgccggactgcgccgccgcaacgcgcccatcaagcaggtgctgctg
gccggcgacgtggtggtgggcgtgggcaacatctacgcgtccgaagcgctgttcctggcg
ggcatccggcccacgacccgggcttcgcgcctgggccgcgagcgcgctttgcgcctgcat
gccgcggtgcgccaggtcctggcgcaggccgtcagccgcggcggcagcaccctgcgcgac
ttttccaacgccgatggccaggccggctatttccagctcgaagccatggtctacgaccgg
gcggggcagccctgccgcatctgcgccacaccggtacgcagcatccgccagggccagcgc
gcgactttctactgcccttcctgccagacctga

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