KEGG   Rickettsia typhi B9991CWPP: RTB9991CWPP_02215
Entry
RTB9991CWPP_02215 CDS       T01810                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rtb  Rickettsia typhi B9991CWPP
Brite
KEGG Orthology (KO) [BR:rtb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rtb03016]
    RTB9991CWPP_02215
Enzymes [BR:rtb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     RTB9991CWPP_02215
Transfer RNA biogenesis [BR:rtb03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    RTB9991CWPP_02215
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC DUF5638
Other DBs
NCBI-ProteinID: AFE55146
Position
complement(575550..576395)
AA seq 281 aa
MQIIDKQKTLEEFCDRLAHHKSLSIDTEFERRYTYYAQLSIIQVKAEGYCGIIDTLSNLD
LNIFNKLLIDNNITKIFHAPREDLEIFYNLFKTLPSNIFDIQIAASICGFGQQLSYDNLC
YKLIGITIDKTHQKSNWLKRPITSDMLNYAILDVEYLYKIYKELNNIIISNNLTNKYQHT
LGTLLNVRNYKVELKDAWKKIRYKSDDKNFNRIIQILAAYREENAQTINIPRQHFILDED
LIKLCKNNPLNYKDFKNLKLKSKYLHKQKYKDEIISLFNNL
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcaaattatagataaacaaaaaacactagaagaattttgtgacaggttagcacatcat
aaatctttaagcatagatactgagtttgagcgtcgctatacttattatgctcagcttagt
ataattcaagttaaagcagaaggatattgcggaataattgatacattaagtaatttagat
ttaaatatttttaataagctacttatagataataatattactaaaatatttcatgcgcct
cgtgaagatttagagattttttataatttatttaaaacactaccttctaatatttttgat
atacaaattgcagcaagtatttgcggcttcggtcaacagttaagctatgataatctttgc
tataagttaatcggtattactatagataaaactcatcaaaaatctaactggctaaaacgc
cctatcactagtgatatgttaaattatgctatattagacgtagagtatttgtataaaata
tataaagaattaaataatataattattagcaataatttaactaataaatatcagcatact
cttggtactttgttaaatgttagaaattataaggttgaattgaaagatgcatggaaaaaa
ataagatataaaagtgatgataagaattttaatcgcataattcaaatacttgcagcctat
cgtgaagaaaatgcacaaactataaatattccacgtcagcattttattttagacgaagat
ttaataaagctttgtaaaaataatccattgaattataaagattttaaaaatctaaaatta
aaaagtaaatacttacataaacaaaaatataaagatgaaataataagtttatttaataac
ttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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