KEGG   Rathayibacter toxicus WAC3373: APU90_09805
Entry
APU90_09805       CDS       T04269                                 
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rtc  Rathayibacter toxicus WAC3373
Pathway
rtc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rtc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APU90_09805 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtc03400]
    APU90_09805 (ruvB)
Enzymes [BR:rtc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     APU90_09805 (ruvB)
DNA repair and recombination proteins [BR:rtc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     APU90_09805 (ruvB)
    RecFOR pathway proteins
     APU90_09805 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 Mg_chelatase TIP49 Zeta_toxin AAA_22 MCM AAA_14 nSTAND3 Sigma54_activ_2 NB-ARC AAA_3 Rad17 IstB_IS21 AAA_18 NTPase_1 DUF815 AAA_33 AAA_25 AAA_19 AAA_24 RNA_helicase
Other DBs
NCBI-ProteinID: ALS58021
UniProt: A0A0U1PRF4
Position
2154749..2155789
AA seq 346 aa
MSGDNLLASEAASEAEIVFEGALRPKSLREFVGQRKVRGQLELLLKAAALQGRTPDHILL
AGPPGLGKTTLAMIVAEESSSPLRLSSGPAIQHAGDLAAVLSSLLPGEILFIDEIHRMAR
SAEEMLYLAMEDFRIDIMVGKGAGATSVPLDLAPFTLVGATTRSGLLPNPLRDRFGFTAH
LEFYAEDELQQVLARAARMLELAIDAEAVAEIAGRCRGTPRIANRLLRRVRDYALVHGGN
ADICAVQAALELYDVDALGLDRLDRAVMDTVLTRFDGGPVGLNTLAVSVGEEAETVEAVV
EPFLVRIGLLTRTPRGRVATADAYRHFGIDPRGTAASQRSLFGNDL
NT seq 1041 nt   +upstreamnt  +downstreamnt
gtgagcggcgacaacctgctcgcttcagaggccgcctccgaggctgagattgtcttcgag
ggcgcgttgcgtccgaaaagcctgcgcgagttcgtgggccaacggaaagtacgcggtcag
ctagagctgctgctcaaggcggcagctctgcagggtcgcacccccgaccacatcctgctg
gccggtccgcccgggctcggcaagaccacgctcgcgatgattgtcgcagaagagagttcg
tccccgctgaggctttcgagcggacctgcgatccagcacgctggtgatctcgcggcggtg
ctctcctcccttctgcccggcgagatccttttcatcgacgaaattcaccgcatggcgcgc
tcggcagaagagatgctctatttggcgatggaggattttcgcatcgacatcatggtcggt
aagggggccggagccacgtcggtgccgctggatcttgcgccctttacgcttgtcggtgcg
accactcgctcggggttgttaccgaatccgctgcgtgatcgctttggcttcaccgctcac
ctggagttttacgcagaagacgagctgcagcaggttctggccagggccgcgcggatgctc
gaactggcgatcgatgcggaggcggtggccgagatcgccggccggtgccgcggtactccg
cgtatcgccaaccgtctccttcggagggtacgtgattatgcgcttgtgcacggcggcaat
gctgacatttgcgctgtgcaggcggcgctcgaactctacgacgttgatgctctcggtctg
gaccggctcgaccgtgccgtgatggacacggtgctgacccgattcgacggcgggccggtc
ggtttgaacactctcgctgtgtcggtcggcgaggaggcggagactgtcgaagcggtcgta
gagccttttctggtgcggatcggcctgctgacacgcacgccccgcggtcgggttgccacc
gccgatgcttatcggcacttcggcattgacccgcgcgggacagcagcgtcccagcggtcc
ctgttcgggaatgacctataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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