KEGG   Rathayibacter tritici: A6122_1116
Entry
A6122_1116        CDS       T04388                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
rtn  Rathayibacter tritici
Pathway
rtn00300  Lysine biosynthesis
rtn00550  Peptidoglycan biosynthesis
rtn01100  Metabolic pathways
rtn01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rtn00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    A6122_1116
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A6122_1116
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    A6122_1116
Enzymes [BR:rtn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     A6122_1116
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase ACD
Other DBs
NCBI-ProteinID: AND16264
UniProt: A0A160KSE2
Position
1273401..1274825
AA seq 474 aa
MIALTLTEIAEAVSGRLHLAGSAATAATVVDGATETDSREIAPGGIFVAKRGEHTDGHLF
APAALEHGAALLIVERPLDLDVPQVLVDDSVEALGALATEVVRRVRAKGGLTVIGVTGSN
GKTTTKNLLRTILERVGETVAPRGSFNNEVGAPITMLQVSESTRFLVAEMGASAVGEIRR
LVRMAKPDVGVVLAVGLAHAGEFGGIERTLEAKTEMVADLTVDDVAVLNADDGRVASMAA
RAAARVLWFGRGESADVRAVDIDATPDGTRFTIEVAAGEGRESARAELLLRVLGEHHVMN
ALAATAAALSVGVTLPAIVDALATVTLAERGRMEVLGGEDVRVINDAYNASPDSTAAALR
TLAQIAKPQGRTVAVLGEMSELGEWADEEHDRVGLLAVRLNIAQIVVVGRGARRIHVAAE
REGSWSGESVFAETSDEAFAFLEEYLRPGDTVLVKSSNSAGLRFLAERLGERHR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgatcgccctcaccctcaccgagatcgccgaggccgtctccggccgcctccacctggcc
ggctcggccgccacggccgccaccgttgtggacggagcgaccgagaccgattcccgcgag
atcgcgcccggcgggatcttcgtcgccaagcgcggcgagcacaccgacggccacctcttc
gcgcccgccgcgctcgagcacggggctgcgctcctgatcgtggagcgtccgctcgacctc
gacgtgccgcaggttctcgtcgacgactcggtcgaggcgctcggcgccctcgcgaccgag
gtcgtccgccgtgtgcgagcgaagggtgggctcaccgtcatcggtgttaccggttcgaac
ggcaagacgacgaccaagaacctcctgcgcacgatcctcgagcgcgtcggcgagacggtc
gcgccgcgcggctccttcaacaacgaggtcggtgcgccgatcacgatgctgcaggtgtcg
gagtcgacgcgcttcctcgtcgccgagatgggggcgagcgcggtcggcgagatccgccgc
ctcgtccggatggcgaagccggatgtcggcgtcgtgctcgcggtgggcctcgcgcacgcg
ggggagttcggcgggatcgagcgcacgctcgaggccaagaccgaaatggtcgccgacctc
accgtcgacgacgtcgccgtgctgaacgctgatgatggccgtgtcgcctcgatggcggcc
cgcgccgccgctcgcgtcctctggttcggccgcggcgagagcgctgatgttcgcgccgtc
gacatcgacgccaccccggacggcacccgcttcacgatcgaggtcgcagcgggggagggc
cgggagtccgcccgtgccgagctcctgctgcgcgtcctcggcgagcaccacgtgatgaac
gccctcgcggcgaccgccgccgcgctctcggtcggagtgacgctgcccgcgatcgtggac
gcgctcgccaccgtcaccctcgccgagcgcggccggatggaggtcctcggcggcgaggac
gtccgcgtcatcaatgacgcctacaacgcgagccccgactccaccgccgccgcgctgcgc
acgctcgcccagatcgcgaagccccaggggcgcacagtcgcggtcctgggcgagatgagc
gaactcggcgagtgggccgacgaggagcacgatcgcgtcggcctgctggccgtgcgcttg
aacatcgcccagatcgtcgtggtgggccgcggcgcccggcgtatccacgtcgcggccgag
cgcgaggggtcctggagcggcgagtccgttttcgccgagacctcggacgaggcgttcgcg
ttcctggaggagtacctgcgcccgggtgacaccgtgctggtcaagtcctccaactccgcg
ggcctgcgtttcctcgccgagcgtctcggggagcgccaccgatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (26)   

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