KEGG   Rhizobium tropici: RTCIAT899_CH14655
Entry
RTCIAT899_CH14655 CDS       T02432                                 
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rtr  Rhizobium tropici
Pathway
rtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RTCIAT899_CH14655 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_CH14655 (ruvB)
Enzymes [BR:rtr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RTCIAT899_CH14655 (ruvB)
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RTCIAT899_CH14655 (ruvB)
    RecFOR pathway proteins
     RTCIAT899_CH14655 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_14 AAA_3 AAA_22 Rad17 AAA_2 AAA_16 AAA_17 nSTAND3 AAA_18 RNA_helicase AAA_28 DUF815 TsaE AAA_33 NTPase_1 AAA_24 IstB_IS21 NB-ARC ABC_tran Sigma54_activ_2 AAA_7 Cytidylate_kin NACHT PduV-EutP
Other DBs
NCBI-ProteinID: AGB72305
Position
complement(2948999..2950039)
AA seq 346 aa
MSEAARLISPEKRGEDIDATLRPQSLDEFTGQAEARANLKVFIEAAKGRGEALDHVLFVG
PPGLGKTTLAQIMAKELGVNFRSTSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLNPAV
EEILYPAMEDFQLDLIIGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPVRLS
FYTVEELELIVRRGARLMGLGMTDEGAREIARRARGTPRIAGRLLRRVRDFAEVAKVEAV
TREIADEALTRLLVDNVGFDQLDKRYLNMIAVNFGGGPVGIETIAAGLSEPRDAIEDIIE
PYMIQQGFIQRTPRGRVLTAIAWKHLGLQPPKDLEAAQFGLFREGD
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgagtgaagccgcacgtctgatatcgccggaaaagcggggcgaagacatcgatgcgacg
ctcaggccgcaatcgctggacgaatttaccggccaggcggaagcgcgcgccaatctgaag
gtcttcatcgaggcggccaaggggcgcggcgaggcgctggatcatgtgctgttcgtcggt
ccgcccggcctcggcaagacgacattggcgcagatcatggcgaaggaactcggcgtcaat
tttcgctcgacgtccggcccggtcatcgccaaggcgggcgatcttgcggcgctgctcacc
aatctcgaagagcgcgacgtgctcttcatcgacgaaatccaccgtttgaatccggctgtc
gaggaaatcctctatccggccatggaggatttccagctcgatctgatcatcggcgaaggc
ccggcggcgcgttcggtgaagatcgatctcgccaagttcactctggtcgcggccacgacc
cgtctcggcctgctgacgacaccgctgcgcgaccgtttcggtattccggtacgtctaagt
ttttatacagtcgaagagctggagctgatcgtccggcgtggtgcgaggctgatgggtctt
ggtatgaccgatgaaggcgcgcgcgagattgcaagacgcgcccgcggcacgccacgcatc
gctggccgactgctgcggcgcgtgcgcgatttcgctgaggtcgccaaggtcgaagcggtg
acgcgcgagattgccgacgaggcactgacacggcttctcgtcgacaatgtcggcttcgat
cagctcgacaagcgctatctcaacatgatcgcagtcaatttcggcggcggccctgtcggt
atcgagaccatcgccgctggcctttccgagccgcgcgacgcgatcgaggatattatcgag
ccctatatgatccagcagggcttcattcagcgtacgccgcgcggccgtgttttgaccgcg
atcgcctggaaacatctcggcctgcagccgcccaaagacctggaggccgcgcagttcggg
ttgttccgggagggcgattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (31)   
   Pfam (31)   
All databases (40)   

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