KEGG   Rhizobium tropici: RTCIAT899_CH15330
Entry
RTCIAT899_CH15330 CDS       T02432                                 
Name
(GenBank) sarcosine oxidase subunit alpha
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
rtr  Rhizobium tropici
Pathway
rtr00260  Glycine, serine and threonine metabolism
rtr01100  Metabolic pathways
Module
rtr_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RTCIAT899_CH15330
Enzymes [BR:rtr01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     RTCIAT899_CH15330
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     RTCIAT899_CH15330
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 DAO NAD_binding_8 GIDA AlaDh_PNT_C HI0933_like Thi4 Pyr_redox_3 Pyr_redox Lycopene_cycl FAD_binding_3 3HCDH_N Fer2_BFD
Other DBs
NCBI-ProteinID: AGB72439
Position
complement(3089889..3092885)
AA seq 998 aa
MSGANRIAGKGRLTPARTARFTFDGKTYTALEGDTVASALLANGVHLVGRSFKYHRPRGI
LSAGAEEPNALLDISRDAARRQPNVRASVQEVFDGMKAQSQNRWPSLAFDIGGVNNLMSP
FFAAGFYYKTFMWPKSAWKHIYEPFIRRAAGLGVAPTEEDPDHYAGRYAHCDVLVVGAGV
AGLSAALAAAETGAKVILCDEQPDVGGALRFDTGIKIDGAEGYEWAQATVAKLKAMPNVQ
VLTRTTAFGYYNHNFFGLAERVTDHLAKPGRDLPRERLWQVRAKRAILATGAIERHMVFP
NNDRPGIMLASAARAYLNHYGVAVGAKIGVYTAHDSAYEAAFDLKRAGVSIAAIVDSRAR
PGEAVLAEAKRLGIEVLTDYAVVDTSGKLRVASMTVSRNGSSATRKIPVDALLVSAGWTP
SVHLFSQSRGKLKFDTEKQRFLPGTYVQDCLSVGACNGTDGLQAAIEESLAAGELMARAT
GSTNGGEKIQLHAEQAFEWTGGMIGAAEGAGPDTNAKAFVDFQHDVCAKDIRLAVREGMH
SIEHIKRFTTNGMASDQGKLSNMHGLAIAAEMLGKDIPQVGLTTFRAPYTPVTYGTLISH
SRGALFDPARKTPMHAWEEAHGAIFEDVGNWKRAWFYPRAGETMHQAVNRECRTAREVAG
VFDASTLGKIEVVGPDAAEFLNLLYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAE
DRFHVTTTTGGAPRVLHHMEDYLQTEFPHLKVWLTSTTEQWAVIAVQGPKAREIIEPLVE
GQDLSNEAFPHMSVAECKVCGVPARLFRVSFTGEVGYEINVPADYGQSVWEAVWARAEPL
GACAYGTETMHVLRAEKGYIIVGQDTDGTVTPDDAGLAWAVSKKKTDFVGIRGLKRQDLV
KEGRKQLVGLVTRDPKVVLEEGAQIVADPNEQKPMAMLGHVTSSYWSENLGRSIAFALVA
GGRERMGKTLYVPMPDKTISVEVTDLVFFDKEGGRING
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgagcggcgccaatcgtatcgcgggcaaggggcgtttgacgccggccagaaccgctcgc
ttcacttttgacggcaagacctataccgcgctcgagggcgataccgtcgcctcggcgctg
cttgccaacggcgtccatcttgtcggccgttccttcaagtatcaccgtccgcgcggtatc
ctttcggctggagccgaagaaccgaacgcactgctcgatatctcgcgcgatgcggcgcgg
cgacagccgaacgtgcgtgccagcgtgcaggaagttttcgacggcatgaaggctcagtcg
caaaaccgctggccgtcgctcgccttcgatatcggtggcgtcaacaatctgatgtcgccc
ttctttgccgctggcttctactacaagaccttcatgtggccgaagtcggcctggaagcat
atttacgagcccttcatccgccgtgctgccggcctcggcgttgcgccgacggaagaggat
ccggatcactatgccggtcgttacgcccattgcgacgttcttgtcgtgggtgccggcgtc
gccggtctttccgcggcgctcgcggcggctgaaactggcgccaaggtcatcctctgtgac
gaacagccggatgtcggcggcgcgctccgcttcgataccggcatcaagatcgatggcgcc
gaagggtacgagtgggcgcaagcgaccgtcgccaagctcaaggcgatgccgaatgtccag
gtgctgacccgcacgaccgccttcggctattacaaccataatttcttcggccttgccgaa
cgcgtgaccgaccatctggccaaacccggccgcgacttgccgcgcgagcgcctatggcag
gtccgcgccaagcgcgccatcctggcgacaggcgcgatcgaacgccacatggtgtttccg
aacaacgatcgtccgggcatcatgctcgcttcggctgcgcgtgcctatctcaaccactat
ggcgtcgccgtcggtgcgaagatcggcgtctacacggcgcatgattcggcctatgaggcc
gccttcgatctgaagcgcgccggcgtttccatcgctgccatcgtcgacagccgtgcgcgt
ccgggcgaggcggttctcgccgaagcaaagcggctcggcatcgaggtgctgaccgactat
gccgtcgtcgatacatcaggcaagctgcgcgtcgcctcgatgaccgtctcgcgcaacggc
agttccgcaacccgcaagatccccgtggatgccctcctggtttcggcgggctggacgccc
tccgttcatctcttttcgcaatcgcgcggcaagctgaaattcgataccgagaagcagcgc
ttcctgccgggcacctatgttcaggattgcctttcggtcggcgcctgcaacggcacggat
gggctgcaagccgcgatcgaggaatcacttgccgccggcgagctgatggcgcgcgcgacc
ggcagcaccaatggcggagagaagatccagctccacgccgagcaggccttcgaatggaca
ggcggcatgatcggtgctgccgaaggtgcgggaccggatacgaatgccaaggctttcgtc
gatttccagcacgatgtctgcgccaaggatatccgccttgcagtgcgcgaaggcatgcat
tccatcgagcatatcaagcgcttcaccaccaacggcatggcgtccgaccagggcaaacta
tccaacatgcatggcctggcgatcgctgccgaaatgctcggcaaggatattccgcaggtc
ggtctcaccaccttccgcgcgccctatacgcccgttacctacggcacgctgatcagccat
tcgcgcggggctctctttgatcccgcccgcaagacgccgatgcatgcctgggaagaggcg
cacggcgcgatcttcgaagatgtcggcaactggaagcgcgcctggttctatccgcgtgcc
ggcgagaccatgcatcaggccgtcaatcgcgaatgccgtacggcgcgcgaagtggccggc
gtgttcgatgcctcgacgctcggcaagatcgaagtggtcgggccggatgcggcggaattc
ctgaacctcctctacaccaatgcctgggatacgctgaagcccggccgctgccgctacggc
atcatgacccgcgaagacggcttcgtttatgacgatggcgtcgtcggacgtctggccgag
gatcgcttccatgtgacgaccacgacgggcggtgcgccgcgtgtgctgcatcatatggaa
gactatctgcagaccgagttcccgcacctgaaggtgtggctgacctcgaccaccgagcaa
tgggctgttatcgccgtacagggtccgaaggcacgcgagatcatcgagccgctggtcgag
ggccaggatctgtccaacgaggccttcccgcatatgagtgtcgccgagtgcaaggtttgc
ggcgtgccggcgcggctgttccgcgtctccttcaccggtgaagtcggctacgaaatcaat
gtgccggccgattatggccagtcggtttgggaggccgtatgggctcgcgctgagccgctg
ggcgcctgcgcctacggcaccgagaccatgcacgtgctccgcgctgagaagggctatatc
atcgtcggccaggataccgacggcacggtgacgcccgatgacgccggccttgcctgggcc
gtttccaagaagaagaccgatttcgtcggtattcgcggcctgaaacggcaggatctggtc
aaggaaggccgcaagcagctcgtcggtctcgtcacccgcgatccgaaggtggtgctggag
gagggcgcacagatcgttgccgatccgaacgagcagaagccgatggccatgctcggccat
gtcacctcgtcctactggtccgaaaatctcggccgctccatcgccttcgcgctggttgcc
ggcgggcgcgagcgcatgggcaagacgctctatgtgccgatgcccgacaagacgatatca
gtcgaggtgacggatctggtattttttgacaaggaaggaggccggatcaatggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (19)   
   Pfam (19)   
All databases (40)   

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