KEGG T02432: RTCIAT899

Rhizobium tropici: RTCIAT899_CH16825

Entry

RTCIAT899_CH16825 CDS T02432

Gene name

sucA

Definition

oxoglutarate dehydrogenase (succinyl-transferring), E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

rtr Rhizobium tropici

Pathway

rtr00020	Citrate cycle (TCA cycle)
rtr00310	Lysine degradation
rtr00380	Tryptophan metabolism
rtr01100	Metabolic pathways
rtr01110	Biosynthesis of secondary metabolites
rtr01120	Microbial metabolism in diverse environments

Module

rtr_M00009	Citrate cycle (TCA cycle, Krebs cycle)
rtr_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rtr00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rtr00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rtr00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh CLASP_N

Other DBs

NCBI-GI:

440228183

NCBI-GeneID:

14430001

UniProt:

L0LMW8

Position

complement(3409131..3412115)

AA seq 994 aa
MARQEANEQFQITSFLDGANAAYIEQLYARYEDDPSSVSDEWRSFFKALEDSPDDVRKAA
KGASWQRKNWPIPAKGDLVSALDGDWGVVEKVIETKLKAKAETAGTPASATDVLQATRDS
VRAIMMIRAYRMRGHLHAKLDPLGIAAPVEDYKELSPEAYGFTEADFDRKIFIDNVLGLE
FATVREMIGILERTYCSTLGVEFMHISNPEEKAWIQERIEGPDKGIAFNPERKKAILQKV
IEAEGYEQFLDVKFKGTKRFGLDGGESLIPALEQILKSGSQLGLREAVFGMAHRGRLNVL
SQVMGKPHRAIFHEFKGGSYAPDEVEGSGDVKYHLGASSDRDFDGAKVHVSLTANPSHLE
IVNPVVMGKARAKQDMGATQWDGDIIPLSERAKVVPLLIHGDAAFAGQGVVAEILGLSGL
RGHRVAGTMHVIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVYAAKI
ATEFRMKFHKPVVLDMFCYRRYGHNEGDEPSFTQPNMYKVIRAHSTVLQIYSQRLVSEGV
LTEGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGEWSGLHTADNADEQRRGKTAVPM
KSLKEIGRKLSEIPAGFHAHRTIQRFMENRANMVQTGEGIDWAMAEALAFGSLVVEGHKI
RLSGQDCERGTFSQRHSVLYDQETEERYIPLANLSPTQARYEVINSMLSEEAVLGFEYGY
SLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHSS
ARLERYLQLCAEDNMQVANVTTPANYFHILRRQLKRDFRKPLILMTPKSLLRHKRAVSTL
AEMAGESSFHRLLWDDAELIKDGPIKLQKDNKIRRVVICSGKVYYDLLEEREKRGIDDVY
LLRIEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDAKYQR
VRYTGRPAAASPATGLMSKHLSQLAAFLEDALGG

NT seq 2985 nt +upstreamnt +downstreamnt
atggcaaggcaagaagccaacgagcaatttcagatcacctcgttcctggatggcgccaat
gctgcctatatcgagcagctctacgcgcgctacgaggacgatccttcatcggtctccgac
gaatggcggtctttcttcaaggcgctcgaggatagccccgacgatgtgaggaaggcagcg
aagggcgcctcttggcagcgcaagaactggccgatcccggcaaagggcgatctggtttcc
gcgctcgacggcgactggggcgtggtcgaaaaggtcatcgaaaccaagctgaaggcgaag
gcggaaaccgccggtacgccggcgagcgcgaccgacgtgctgcaggcgacgcgcgacagc
gtccgcgccatcatgatgatccgcgcctatcgcatgcgcggccacctgcacgccaagctc
gatccgctcggcatcgccgctccggtcgaagactacaaggagctgtcgccggaagcctat
ggtttcaccgaggccgacttcgaccgcaagatcttcatcgacaacgtactcggcctcgaa
ttcgcgaccgttcgcgagatgatcgggatcctcgagcgcacctactgctccaccctcggc
gtcgaattcatgcatatctccaatccggaggaaaaagcatggattcaagagcgcatcgaa
ggtccggacaagggcatcgctttcaaccccgagcgcaagaaggccatcctccagaaggtc
atcgaagccgaaggctatgagcagttcctcgacgtcaagttcaagggcaccaagcgcttc
ggtctcgacggcggcgaatcgctgatcccggcgctcgaacagatcctcaagagcggcagc
cagctcggtcttcgcgaagccgtcttcggcatggctcaccgcggccgtctgaacgtgctg
tcccaggtcatgggcaaaccgcaccgcgccattttccacgagttcaagggcggctcctac
gcgccggacgaagtcgaaggctcgggcgacgtcaagtaccatctcggcgcttcttcggac
cgcgatttcgatggcgcgaaggtgcacgtctcgctgacggcaaacccgtcgcatctcgaa
atcgtcaatccggtcgtcatgggcaaggcccgcgccaagcaggacatgggcgccacccaa
tgggacggcgacatcatcccgctgtccgagcgcgccaaggtcgtgccgctgctgattcat
ggcgacgcggctttcgctggccagggcgtcgttgccgaaatcctcggtctttccggtctg
cgcggccatcgcgttgccggtacgatgcacgtcatcatcaacaaccagatcggcttcacc
accaatccggccttctcgcgttcgtcgccctatccgtccgacgtcgccaagatgatcgaa
gcgccgatcttccacgtcaacggcgacgatccggaagcggtcgtctacgccgcgaagatc
gcgaccgaattccgcatgaagttccacaagcctgtggtcctcgacatgttctgctatcgc
cgctacggccacaacgaaggcgatgaaccgtccttcacgcagccgaacatgtacaaggtc
atccgcgcccacagcacggtcctgcagatctactcgcagcggctggtcagcgaaggcgtg
ctgaccgaaggcgaagtcgaaaagatgaaggccgattggcgtgcccatctcgagcaggag
ttcgaggccggccagtcctacaagccgaacaaggccgactggctggacggcgagtggtcc
ggtctgcacacggccgacaatgccgacgaacagcgccgtggcaagacggccgtgccgatg
aagtcgctgaaggaaatcggtcgcaagctgtcggaaatcccggccggcttccacgcgcac
cgcaccatccagcgcttcatggaaaatcgcgccaacatggtgcagaccggcgagggcatc
gactgggccatggcggaagccctggcattcggttcgctcgtcgtcgaaggccacaagatc
cgtctgtccggtcaggattgcgaacgcggcaccttctcgcagcgtcattcggttctctac
gatcaggagaccgaagagcgctacattccgctcgccaatctctcgccgacccaggcccgc
tacgaagtcatcaactcgatgctctcggaagaagcggttcttggcttcgaatatggctac
tcgcttgcccgtccgaacgcgctgactctctgggaagctcagttcggcgatttcgccaac
ggcgcgcaggtcgtcttcgaccagttcatctcgtctggcgaacgcaagtggctgcgcatg
tccggcctcgtctgcctgctgccgcatggctatgaaggtcagggtccggagcactcttcg
gctcgcctggaacgctatctgcagctctgcgccgaagacaacatgcaggtcgccaacgtc
acgacgccggcgaactacttccacatcctgcgccgtcagctgaagcgcgacttccgcaag
ccgctgattctgatgacgccgaagtcgctgctgcgccacaagcgtgccgtatcgacgctc
gcggagatggccggcgaaagctcgttccaccgcctgctgtgggacgatgccgaactgatc
aaggacggcccgatcaagctgcagaaggacaacaagatccgtcgcgtcgtcatctgctcg
ggcaaggtctactacgatctcttggaagagcgcgagaagcgcggcatcgacgatgtctac
ctgctgcgcatcgaacagctctatccgttcccggccaaggcgctcatcaacgagcttagt
cgcttccgcaatgcggaaatggtctggtgccaggaagagccgaagaacatgggcgcatgg
tccttcatcgatccctatctggaatgggtgcttgcccatatcgatgccaagtaccagcgc
gttcgctacaccggccgtccggccgccgcctccccggcgacgggcctgatgtccaagcat
ctgtcgcagcttgcggcgttcctcgaggacgcgctcggcggttga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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