KEGG T02432: RTCIAT899

Rhizobium tropici: RTCIAT899_PB00395

Entry

RTCIAT899_PB00395 CDS T02432

Definition

putative ATP-dependent DNA ligase protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rtr Rhizobium tropici

Pathway

rtr03410	Base excision repair
rtr03420	Nucleotide excision repair
rtr03430	Mismatch repair
rtr03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rtr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rtr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rtr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rtr03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 mRNA_cap_enzyme

Other DBs

NCBI-GI:

440222522

NCBI-GeneID:

14431886

UniProt:

L0LRP5

Position

pRtrCIAT899b:complement(67740..68804)

AA seq 354 aa
MTTRRKASMPLLDESGSTLQSRQVRKRDPAQPSLPFDPMPERIEPCLALLKPTPPKGADW
LFEVKWDGYRLALHIHRKDVKVITRGGHDWTHRFPAIVDAARALGVNSAILDGEAVVLDN
QGRSDFGALQRSLGGRGGKKASDEAILYAFDLLYLDGHDLTGTELSVRRHLLEDLISPTS
DGAVRLSQEMALDGEVLLEHACRAGLEGIIAKHRDRPYRSGRTGDWQKIKCIQSESFMVV
GYEQSSSARGGIGSLLLAARKGYDWAYVGSVGTGFNTKDAEYLRKTLDKLKTARPVVPLK
GKNLVFAQPTIIAEIEFRGWTHDGSLRHASYKGLREIQDNAAVFDIAERPAPSE

NT seq 1065 nt +upstreamnt +downstreamnt
atgacgacaagacgcaaagcctcgatgccgctgctcgacgaatccggctcgacccttcag
tcacgccaggtgcgaaagcgcgatcccgcccagccaagcctgcccttcgatccgatgccc
gagcgcatcgagccgtgcctggcgcttttgaagccgacaccaccgaagggagccgactgg
ctgttcgaggtgaaatgggacggctaccgtctggcgctccacatccatcggaaggatgtg
aaggtcatcactcgcggaggccacgactggacgcaccgctttccggcaattgtcgatgcg
gcgcgtgcactcggggtcaacagcgccattctcgacggcgaagccgtcgtgcttgacaat
caaggccgctccgacttcggggcattgcagcgctcgcttggtggccgcggcggcaaaaag
gcgtcagacgaagcgatcctatatgcgttcgaccttctctatcttgacggccacgacttg
actggcaccgagctttcggtgcggcggcatctgctggaggatctcatttcaccgacgagc
gacggcgccgttcgcctgtcgcaggagatggccttggacggcgaggtcctgctggagcac
gcatgccgggcagggcttgagggcattatcgccaagcaccgcgaccggccatatcgctcc
gggcgcaccggcgattggcagaagatcaagtgcatccaaagcgagagcttcatggtcgtc
ggctatgaacagtcgtcctcggcacgcggcggcatcggtagcctgctgctcgccgcgcgg
aaaggttatgattgggcctatgtcggctcggtcggaaccggcttcaacacgaaagatgcc
gaatacctgcgcaagaccctcgataagctgaagacagccaggccggtcgtgccgctgaag
ggcaagaatctcgtctttgctcagccgacaattattgccgaaatcgagttccgcggctgg
acacatgacggcagccttcgtcacgcctcctacaagggtctaagggaaatccaggacaac
gccgcagtcttcgacattgccgagcggcctgcgccaagcgaatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

Download RDF

DBGET integrated database retrieval system