KEGG   Rickettsia typhi Wilmington: RT0489
Entry
RT0489            CDS       T00193                                 
Symbol
pnp
Name
(GenBank) Polynucleotide phosphorylase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rty00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RT0489 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rty03019]
    RT0489 (pnp)
   03016 Transfer RNA biogenesis [BR:rty03016]
    RT0489 (pnp)
Enzymes [BR:rty01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     RT0489 (pnp)
Messenger RNA biogenesis [BR:rty03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RT0489 (pnp)
Transfer RNA biogenesis [BR:rty03016]
 Prokaryotic type
  tRNA degradation factors
   RT0489 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2
Other DBs
NCBI-ProteinID: AAU03961
UniProt: Q68WN1
Position
624535..626772
AA seq 745 aa
MFNEITKSVIWNRQVLEISTGKIARQADAAVTVKMGNSILLCTCVVANKVKDGIGFFPLT
INYREMAYSAGKIPGGFLKREGKASDKEILVSRLIDRPIRPLFHQAFIHETHITCSVLSY
DPETPVDILAIIGASAALSISPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTKDSVMMVESEAHLLSEEKMLEAIKFGFENFQTVIKLIKEFAKEAKKPKFEMQDLYPSS
LKKEIGKLFAKEIEQAFAIKSKQERNANLALIHEKVLTHFVCDIENKKYNNYQIESTLKA
ISADILRNKILEQNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMYAGVPIKAPVAGIAMGLIKEGDKFAILS
DIIGDEDYFGDMDFKVAGTSKGITALQMDIKISGIDFKIIQVALEQARHGRLHILEQMNK
IISKPNSELSKNAPSSTTIKIDKDKIKDIIGPGGKIIKEICETSNAKIDISDDGTVSVYA
ADRDKIKVALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISETRI
DKVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNACKDHSLNNPKQKNNVKEDSEPEQRRDA
SKKRTWNEDNNTEMSEVITERKYFT
NT seq 2238 nt   +upstreamnt  +downstreamnt
atgtttaatgaaataactaagagcgtgatatggaataggcaagtgcttgagattagtaca
ggtaaaatagcaagacaagctgatgcagcagttactgtaaaaatgggtaattcaatttta
ttatgtacgtgtgtagtagcgaacaaagtgaaagatggtataggatttttccctttaaca
attaattatagagaaatggcatattctgctggtaagataccaggggggtttttaaaacgt
gaagggaaagcatcagataaagaaattttagtatctcgtttaatagatagaccaattaga
ccattatttcatcaagcttttatacatgaaacgcatataacttgcagtgttctttcatat
gatcctgaaactcctgtagatatacttgcaattataggtgcatctgctgcacttagcata
tcccctgccccttatctagaaatagttgctgcaagtaaagtaggtttaattaatggtgaa
tttgttttaaatcctacacttgaattattaaaaacaagtcagcttgatttagtagtagca
ggaacaaaagattcagtgatgatggttgaatcagaagcacatttactctctgaagaaaaa
atgttagaagcaataaaatttggatttgaaaatttccagacagtcatcaagctaattaaa
gaattcgcgaaagaagctaaaaagcctaaattcgaaatgcaagatttatatccttcttca
ttaaagaaagaaattgggaaattatttgcaaaagaaattgaacaagcttttgcgataaaa
tctaagcaggaacgtaatgctaatttagctttaatacatgaaaaagttcttacacatttt
gtatgcgatatagaaaataaaaaatataataattatcaaattgaatcaactttaaaagct
atttcagcagatatattacgtaataaaattttagaacaaaatatacgtattgatggaaga
agcacaacagatataagacaaattgcttgtgaagtaggtttattaccatcagcacacgga
tcagctttatttactagaggtgaaacgcaaagtttagttagtactacatttgggactagt
ttagatgagcaaatagttgacagtttagaaggtgaatataaagaacgttttatgctaaat
tatatattcccgccctattctgtcaatgaagcaatgccaatgaaagctcctagtcgtcgt
gaagttggacacggtaaacttgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgctgaaactactgagtctaacggttcttcttcg
atggcaactgtttgcggtagttctcttgctttaatgtatgctggcgtgccaataaaagca
ccggttgctggtattgctatgggtcttattaaggaaggtgataaatttgctatattatcg
gatattatcggtgatgaagattatttcggtgatatggattttaaagttgcaggcactagt
aaagggattactgcattacaaatggatattaaaatatcaggaatagattttaaaataatc
caagtagctttagagcaagcacgacacggtcgtttgcatatactggagcaaatgaataaa
attatcagtaaaccaaatagtgaactaagtaaaaacgccccttcttctactactataaaa
atagacaaagataaaattaaagatattatagggccaggtggtaaaataataaaggaaatt
tgtgaaactagtaatgcgaaaatagatataagcgatgacggcacggtttctgtttatgct
gcagatagggataagataaaagttgcattggataaaattaaagcgattgctgttgagcct
gaaattggtgaaatatttaacggtacggtaatgaaagttttagattctggtgcttttatt
aattatttagggaataaagacggctttgttcatattagtgaaatttcagaaacaagaata
gacaaggttagcagtgttttaaaacaaggtgatatagtaaaagttaagctaataggcttt
gataataaaggtaaagcaaaactaactattaaaaatgcttgcaaagatcactctttaaat
aatccaaaacaaaaaaataatgttaaagaagattcagaacctgagcagcgacgtgatgct
agtaaaaaacgtacttggaatgaagataataatactgaaatgtctgaagtaattacagaa
cgtaaatattttacataa

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