KEGG   Rufibacter sp. DG15C: TH61_11930
Entry
TH61_11930        CDS       T04326                                 
Name
(GenBank) hypothetical protein
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rud  Rufibacter sp. DG15C
Pathway
rud00010  Glycolysis / Gluconeogenesis
rud00020  Citrate cycle (TCA cycle)
rud00260  Glycine, serine and threonine metabolism
rud00280  Valine, leucine and isoleucine degradation
rud00310  Lysine degradation
rud00380  Tryptophan metabolism
rud00620  Pyruvate metabolism
rud00630  Glyoxylate and dicarboxylate metabolism
rud00640  Propanoate metabolism
rud00785  Lipoic acid metabolism
rud01100  Metabolic pathways
rud01110  Biosynthesis of secondary metabolites
rud01120  Microbial metabolism in diverse environments
rud01200  Carbon metabolism
rud01210  2-Oxocarboxylic acid metabolism
rud01240  Biosynthesis of cofactors
Module
rud_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rud_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rud_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rud_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rud00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    TH61_11930
   00020 Citrate cycle (TCA cycle)
    TH61_11930
   00620 Pyruvate metabolism
    TH61_11930
   00630 Glyoxylate and dicarboxylate metabolism
    TH61_11930
   00640 Propanoate metabolism
    TH61_11930
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    TH61_11930
   00280 Valine, leucine and isoleucine degradation
    TH61_11930
   00310 Lysine degradation
    TH61_11930
   00380 Tryptophan metabolism
    TH61_11930
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    TH61_11930
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rud04147]
    TH61_11930
Enzymes [BR:rud01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     TH61_11930
Exosome [BR:rud04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   TH61_11930
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO FAD_binding_2 FAD_oxidored NAD_binding_8 HI0933_like GIDA 2-Hacid_dh_C Lys_Orn_oxgnase FAD_binding_3 3HCDH_N Lycopene_cycl Amino_oxidase Trp_halogenase Thi4 AlaDh_PNT_C
Other DBs
NCBI-ProteinID: AMM51744
UniProt: A0A127B3A3
Position
2778196..2779590
AA seq 464 aa
MASTYDLIVVGSGPGGYVAAIRASQLGMKVGVVEKAELGGICLNWGCIPTKALLKSAQVF
EYIKHAADYGISVDNASADFGAVVNRSRGVAQGMSKGIQFLFRKNKIDHIAGYGKLKGKG
QLEVTSEDGQAQIYEAKHIILATGARSRELPNLPIDGQKIIGYRQAMVLENMPKKMVVVG
SGAIGVEFAYFYNAMGTEVTVVEYLPNIVPVEDEEISKQLEKSFKKSGINVMTNSEVLSV
DTSGAGCVVKIKTAKGEETIEADVVLSAVGIQTNLENLGLEEVGVAVERGRVITDDFYKT
NVEGVYAIGDIVKGPALAHVASAEGIICVEAIAGHHPEPLDYKNIPGCTYCSPEIASVGY
TEKECKEMGREIKVGKFPFSASGKASAGGVKDGFVKVIFDAKYGEFLGAHMIGANVTEMI
AEIVVARKLETTGHEIIKAVHPHPTMSEAVMEAAAAAYGEVIHL
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggcatcaacatatgatttgatagtggtaggaagcggcccaggtgggtacgtggctgcc
atccgcgcttcgcaattgggtatgaaagtaggcgtggtagagaaagccgaattgggcggc
atctgcctcaactggggctgtatccccacaaaagccttattgaagagtgcacaggttttt
gaatacatcaagcatgcggctgactacggcatcagcgtagataatgcgtcggctgacttt
ggggcggtggtaaaccgtagccgtggcgtagcccagggcatgagcaaaggcatccagttc
ctgttcagaaaaaacaagattgaccacatagccggttacggcaaactaaaaggcaaaggc
cagttagaggtgacctctgaggacggccaagcccaaatctacgaagccaagcacatcatc
ctggctactggtgcccgctcccgtgaattgccgaacctgcctattgacggtcagaaaatc
attggctaccgccaggccatggtcctggagaacatgccaaagaaaatggtagtggtaggc
tcaggcgccatcggcgtggagttcgcctatttctacaacgccatgggcaccgaggtgacc
gtggtagagtacctgcccaacattgtgccggtagaggacgaagaaatttccaagcaactg
gagaagtcgttcaaaaagtcgggtatcaacgtaatgaccaactctgaagtattgtcagta
gacacgtctggtgcgggttgcgtagtgaaaataaaaaccgccaaaggcgaagaaacaatt
gaggcggacgtagtactttcggctgtgggtatccaaaccaacctggagaaccttggtctg
gaggaagtaggcgtagccgtagagcgtggccgcgtcatcacagatgatttctacaagacc
aacgtggaaggcgtgtacgccatcggtgacatcgtgaaaggtccagccttggcacacgtg
gcctcagcagaaggtattatttgcgtggaggccattgccggtcaccacccagagcctttg
gattacaagaacataccgggctgtacgtattgctcgccagagattgcgtctgtgggctac
acagagaaagagtgcaaggagatgggccgcgaaattaaagtgggcaaattcccgttctct
gcttctggaaaagccagcgccggcggtgtgaaagacggatttgtgaaggtgatttttgac
gccaaatacggtgagttcctgggagcgcacatgattggcgccaacgtaaccgagatgatt
gccgagattgtagtggcccgtaaattggagacgaccggtcatgaaatcatcaaagccgtt
cacccacacccaaccatgtctgaggccgtgatggaagccgctgcggctgcctacggtgag
gtgattcacttatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (88)   

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