KEGG   Rufibacter sp. DG15C: TH61_13920
Entry
TH61_13920        CDS       T04326                                 
Name
(GenBank) 2-dehydro-3-deoxyphosphogluconate aldolase
  KO
K01627  2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
Organism
rud  Rufibacter sp. DG15C
Pathway
rud00540  Lipopolysaccharide biosynthesis
rud01100  Metabolic pathways
rud01250  Biosynthesis of nucleotide sugars
Module
rud_M00063  CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:rud00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    TH61_13920
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:rud01005]
    TH61_13920
Enzymes [BR:rud01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.55  3-deoxy-8-phosphooctulonate synthase
     TH61_13920
Lipopolysaccharide biosynthesis proteins [BR:rud01005]
 Lipid A
  TH61_13920
SSDB
Motif
Pfam: DAHP_synth_1 NeuB DUF3095 TPP_enzyme_N TgMIC1
Other DBs
NCBI-ProteinID: AMM52063
UniProt: A0A127B3J3
Position
3251221..3252033
AA seq 270 aa
MTISIPKLQHTDSDNFFLMAGPCAIEGEEMALQIAEELVRITNRLRIPLIFKGSYRKANR
SRLDSFTGIGDEKALKILAKVSATFGIPTVTDIHESHEAAMAAAYVDVLQIPAFLCRQTD
LLVAAAQTGKVVNIKKGQFLSGESMRFAVDKVKESGNPNVILTDRGNTFGYSDMVVDFRN
IPAMQDNQVPVVMDVTHSLQQPNQASGVTGGKPALIETIAKAAIAVGADGLFIETHPTPA
TAKSDGANMLQLSNLEGLLEKLVRIREAVR
NT seq 813 nt   +upstreamnt  +downstreamnt
atgactatctccattcctaaattacaacatacagactctgacaacttctttttgatggct
ggtccatgcgccattgaaggcgaagaaatggccctgcagattgccgaggagctggtgcgc
atcactaaccgcttacgcattccgcttatcttcaagggctcttaccgcaaagccaaccgc
tctcgtttagactccttcacagggattggtgatgagaaagcgcttaaaatcctggccaag
gtgagcgcgacttttggcatcccaaccgtaacggacattcatgaaagccatgaggctgcc
atggctgctgcttacgtagacgtgttgcagattccggcgttcctttgccgccaaacagat
ttattggtggccgctgcccaaaccgggaaagtggtcaacatcaagaaaggacaattcttg
tctggtgagtccatgcgctttgccgtggacaaggtgaaagaatccggtaacccgaacgtc
atcttgacggaccgtggcaatacattcgggtactcagacatggtagtggacttcagaaac
atacccgccatgcaagacaaccaagtgccagtggtgatggacgtgacgcactcgttgcaa
cagcctaaccaagcctctggcgtaactggcggcaagcctgccttaatagagaccattgcc
aaggcggccattgccgtaggcgcagacggcctcttcattgaaacccacccaacacccgcc
accgcaaagtcagacggcgctaacatgcttcaattgtccaatctagaagggctattagag
aagctggtgagaattagagaagcggtgaggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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