KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00705
Entry
RBI_I00705        CDS       T03158                                 
Name
(GenBank) ABC transporter permease/ATP-binding protein
  KO
K18888  ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rus00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    RBI_I00705
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rus02000]
    RBI_I00705
Transporters [BR:rus02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    RBI_I00705
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 AAA_22 DUF87 AAA_14 FtsK_SpoIIIE AAA_23 nSTAND3 AAA DEAD AAA_29 AAA_16 AAA_28 AAA_15 ABC_membrane_2 MMR_HSR1 RsgA_GTPase T2SSE G-alpha AAA_24 AAA_18 ResIII AAA_30
Other DBs
NCBI-ProteinID: CCO04428
UniProt: W0U3U0
Position
I:788057..789892
AA seq 611 aa
MPPMPPMGPGGRKPGGPHGARLTMEKPKDAKNTLKKLIGYIGRNRYLFFALIGVMLIITL
LNLAAPSIQQIAIDCITLTKKKTSVDFGALGKTLIGLGAVYLLSSVFTYMQGIFSAKLSQ
YTVKTMRKDLFSSLVRLPIKYLDTHSHGDIMSRMTNDVENISTTISQSIGSLISGVLTIV
GTVVIMLLYSPLLTLISLSTVFLTIFVSGVLTKYMKKYFIKQQVLLGEINGEVEEMVVGY
RTVVSYGKEQDAVDKFEKMSNNLKKCGIKAQIFGGVMGPCMNLISNFGFILIAAFGGWFA
IKGFITVGTIQAFILYSKQFSRPINEIANQFANIQTAIAGAERIFEVMDADKETDEGKAD
FEVENVKGDIDFKHIDFSYVPEKQVLKDLDLEVKAGQKIAIVGATGSGKTTIVNLLTRFY
PVDSGEITIDGQSIYDIPKDKLRRSIAIVLQDTVLFKDTIEENIRYGRENATLDEIKAAA
KFANADEFIERLSEGYDTVLAEGGSNLSQGQRQLLSIARAVLADPKILILDEATSSVDTR
TEMHIQSAMVALMKNRTSLIIAHRLSTIRDADKIVVIDGGRVAEQGSHEELIAAKGCYYR
LYQTQFSGVKT
NT seq 1836 nt   +upstreamnt  +downstreamnt
atgcctccaatgcctccaatgggacccggtggaagaaaaccgggcggacctcacggtgca
aggctcacaatggaaaagccaaaagacgcaaagaacacccttaaaaagcttatcggctat
ataggcagaaacagatatctgtttttcgctcttatcggtgtaatgctcattataactctg
ctcaatcttgccgcaccgtctatccagcagatagctatcgactgcatcactctcactaaa
aagaaaacaagcgttgacttcggtgcgcttggcaaaacgctcataggtcttggtgcagtt
tatctcctgtcctctgttttcacctatatgcagggaatattctctgcaaagctttcgcag
tacacagtaaagaccatgcgtaaagacttgttttcaagccttgtaagacttcctataaaa
tatctcgatacccacagccatggcgatataatgagccgtatgacaaacgacgtcgagaat
atctccacaactatctctcagtctataggctcgctcatctcaggcgtgctgaccatagtg
ggaacagttgtcataatgcttctgtattcaccgcttcttacccttatctcactgtctaca
gtgttccttaccatattcgtttcaggcgtactcacaaagtatatgaagaaatacttcatc
aaacagcaggtgcttcttggcgagataaacggtgaagtggaagaaatggtcgttggctat
agaacggtcgtttcctacggcaaggagcaggacgctgttgacaagttcgagaaaatgagc
aacaatctgaaaaaatgcggcataaaagctcagatattcggtggtgtaatgggtccttgc
atgaacttaatatccaatttcggctttatccttatcgcagccttcggcggctggttcgca
ataaaaggctttataacagtgggaaccattcaggcttttatactctattcaaagcagttc
tcacgtcctatcaatgagattgcaaatcagtttgcaaatatccagaccgcaatagcaggc
gcagagcgtatctttgaggtcatggacgccgataaggaaactgacgagggcaaggctgac
tttgaggtggaaaacgtcaaaggcgatatcgacttcaagcatatcgacttctcgtacgtt
cctgaaaaacaggtgctcaaagaccttgaccttgaggtgaaagcaggtcagaaaatagcc
attgtcggtgcaacaggctcaggaaagaccaccatagtaaatcttctcacaagattttat
cccgttgacagcggtgagataaccatagacggtcagagcatttacgatatcccgaaagac
aagctcagacgttccatagccatagttttgcaggatacagtgctttttaaggacaccata
gaggagaatatccgctacggcagagaaaacgctacccttgatgaaataaaggcggcggca
aagtttgcgaacgcagacgagttcatcgaaagactttccgagggttacgacacagtgctt
gccgagggcggctcaaacctttcacaaggtcagcgtcagcttctctccatagcaagagca
gtgcttgccgacccgaagatacttattcttgacgaagccacttcctcggttgataccaga
actgagatgcacattcagtccgcaatggtggctcttatgaaaaacagaacgtcccttatc
atcgctcaccgactttccactatccgtgacgccgataagatagtcgttatcgacggtgga
cgtgttgcagagcagggtagccatgaggaacttatcgccgccaagggctgttactacaga
ctttatcagacgcagttctcaggcgttaagacctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (25)   
   Pfam (25)   
All databases (33)   

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