KEGG   Rhodomicrobium vannielii: Rvan_0003
Entry
Rvan_0003         CDS       T01353                                 
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
rva  Rhodomicrobium vannielii
Pathway
rva03030  DNA replication
rva03430  Mismatch repair
rva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Rvan_0003
   03430 Mismatch repair
    Rvan_0003
   03440 Homologous recombination
    Rvan_0003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rva03032]
    Rvan_0003
   03400 DNA repair and recombination proteins [BR:rva03400]
    Rvan_0003
Enzymes [BR:rva01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Rvan_0003
DNA replication proteins [BR:rva03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Rvan_0003
DNA repair and recombination proteins [BR:rva03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Rvan_0003
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 TruB_C ChapFlgA_N
Other DBs
NCBI-ProteinID: ADP69294
UniProt: E3I475
Position
2561..3682
AA seq 373 aa
MRFVVDRNAMLRALGHITGIVERRNTIPILSNILIGADRDGGLTFKATDLDMEAVEAVPA
KVEVTGAVTVPAHTLHDIVRKLPDGAEIRIERKGEEGRLKVATGRASFELAILPADDFPD
MGQTELPTRFTVDSGELKRLFEKARFAISTEETRYYLNGIYLHAVDGPEGGKLRAVATDG
HRLAQVETACPAGAGGMPGVIVPRKAVGEVIKLLESGAAPVEVTLSPAKIRFAVGDVVLT
SKLIDGSFPDYARVIPTTNKKLLLLENADLVKAVDRVSTLSSEKGRAVKLNAAEGRLVVS
ANNPESGSATEEISAEYQDEPLEIGFNARYLLDITGQIDGTKALFKLADGSSPTLISDET
DASALYVLMPMRV
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgcgctttgttgtcgatcggaacgcaatgctccgcgcgctggggcatatcacgggaatc
gtcgagcggcggaacaccataccgatcctgagcaacatcctgatcggtgcggatcgcgat
ggagggctcacgttcaaggcgaccgacctcgacatggaggcagtcgaagcggtgcctgct
aaggtcgaggtgacgggcgcggtgacggtgcctgcgcatacgctgcacgatattgttcgg
aaactccctgacggcgcggaaatccgtatcgagcgcaagggcgaggaggggcgcctcaag
gtggccaccgggcgcgcgagcttcgaactggcgatcctgcccgccgatgacttccccgac
atggggcagaccgaactgccgacacgcttcaccgtcgacagcggcgagctcaagcgtctg
ttcgagaaggcgcgcttcgccatctctaccgaagagacgcgctattacctgaatggcatc
tatctccacgcggtcgatggcccggagggcgggaagctccgcgcggtggcgacagacggt
catcgtcttgcgcaggtggaaacggcatgccctgccggcgcgggcggaatgcccggcgtg
atcgttccccgcaaggcggtcggcgaagtgatcaagttgctcgagtcgggcgccgcgccg
gtcgaggtgacgctgtcgccagcgaaaattcgcttcgctgtgggtgacgttgtgctcaca
tcgaagctcatcgatggctcattccccgattatgcccgcgtcataccaacaacgaacaag
aagctcctgttgctcgaaaacgcagatctcgtgaaggcggtcgaccgcgtgtcgaccctc
tcctccgagaagggcagggcggtgaagctcaatgcggccgagggacgcctcgtcgtctcg
gcgaacaatcccgaatcaggctcggcgaccgaggagatttcggccgagtatcaagacgaa
ccgctcgaaatcggcttcaacgcccgctatttgctcgatatcaccggccagatcgacggg
acgaaagcgctgttcaagcttgcggatggctcctcgccaacgctgatttcggacgagacg
gacgcgtctgctctgtatgtgctcatgccgatgcgcgtttga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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