KEGG   Rhodomicrobium vannielii: Rvan_0558Help
Entry
Rvan_0558         CDS       T01353                                 

Definition
NAD-binding 3-hydroxyacyl-CoA dehydrogenase protein
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
rva  Rhodomicrobium vannielii
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Class
Metabolism; Overview; Carbon metabolism [PATH:rva01200]
Metabolism; Overview; Fatty acid metabolism [PATH:rva01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:rva00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:rva00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:rva00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:rva01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:rva00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rva00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rva00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:rva00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:rva00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:rva00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:rva00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
631870..634044
Genome map
AA seq 724 aa AA seqDB search
MSSISYQVDADGIATLTIDQPGKSMNVISPEFTEELSEAIERAAADSSVKGIVITSGKSS
FVAGADLIGMSGMIEHARNAPAAEALKVSSRLTEVLRRLETIGKPVATAINGTALGGGFE
IALATHYRVAADDESIKIGQPEVQVGLLPGAGGTQRIPRLIGIMASAPLLLEGKHLSPQQ
AKSSGLIHDVVPAAELLAKAKAWLLSPQAKSVQPWDERGFKVPGGAGGMHPAAAQLFMAA
NAMTRDKTLGNYPAAQAILSAVYEGTQVPIDLGLKIEAKYFLSLLRGPVAPAMIRTLFVN
KGRADKLVRRPQGVPKAKFKKIGMLGAGMMGAAIAYVAASNGIEVVLLDRDVEAAERGKG
YARKLVEKAVSRRKTTEADGQGLLARIHATADYADLADVDYIIEAVFEDRAIKADVTKKV
EAVIRPDVIFGSNTSTIPITSLAEASERPEKFIGIHFFSPAEKMPLVEIIRGKKTSDEAL
AVTLDFVQAIRKTPIVVNDGRGFFTSRFCMNYIGEGEIMLTEGIPAALVENAGKLAGMPV
GPLALADETAIDLGWKIHKAAETDLGDAYTPSAAIGVMEAMYVKNGRAGRKNGKGFYEYP
EGGPKTLWAGLADLFPVKPESEWPSIDDLKKRLLFAQALDAVRTMEDGVLTDPEDGDVGG
IFGLGFAPYTGGPLSMLDGIGIANAVAECERLAARYGERFSPPKLLRDMAAEGRTFYPAA
KAAA
NT seq 2175 nt NT seq  +upstreamnt  +downstreamnt
atgagcagcatctcctatcaagtcgacgcggacggcatcgccacgctcaccatcgaccag
ccgggcaagtcgatgaacgtcatcagccctgaattcaccgaggaactcagcgaggccatc
gagcgcgccgccgccgattcgagcgtgaagggcatcgtcatcacctccggcaagtcgagc
ttcgtcgcaggcgcggaccttatcggcatgtcgggcatgatcgagcacgcgcgcaatgct
ccggccgcggaggcgctgaaggtctcgtcgcgtctcaccgaagtgctgcgccgcctcgaa
accatcggcaagccggtcgcgaccgcgatcaacggcacggcgctcggcggcggcttcgag
atcgcgctagccacgcattaccgcgtcgcggcggatgacgagtccatcaagatcggccag
cccgaggtgcaggtcggcctgctgccgggcgcgggcggcacgcagcgcattcctcgcctc
atcggcatcatggcgtccgcgccgctgctgctcgaaggcaagcacctgtctcctcagcaa
gcgaagtcgtccggtctcatccacgatgtcgtgcccgcggctgagcttctcgcaaaggcg
aaggcgtggcttctgtccccgcaggcgaaatcagtccagccgtgggacgagcgcggcttc
aaggtgccgggcggcgcgggcggcatgcatcccgctgcggcgcagcttttcatggccgcc
aacgccatgacgcgcgacaagacgctcggcaattatccggccgcgcaggcgatcctctcg
gcggtttatgaaggcacgcaggtgccgatcgacctcggcctcaagatcgaggcgaaatat
ttcctctcgctgctgcgcggccccgtcgcgcccgcgatgatccgcacgctgttcgtcaac
aagggccgggcggacaagctcgtgcgccgtccgcagggcgtgccgaaggcgaagttcaag
aagatcggcatgctgggcgcaggcatgatgggcgcggccatcgcctatgtcgcggcgtcg
aacggtatcgaggtggtgcttctcgatcgcgacgtggaagcggccgagcggggcaagggc
tacgcgcggaagctcgtggagaaggccgtttcgcgccgcaagacgacggaggcggacggg
caggggttgctggctcgcatccacgccacggccgattacgccgacctcgctgatgtcgat
tacatcatcgaggccgttttcgaggatcgcgccatcaaggccgacgtgacgaaaaaggtc
gaagccgtgatccggcccgacgtgatcttcggctcgaacacgtccaccatcccgatcacc
agcctcgcggaagcgagcgagcggcctgagaagttcatcggcatccacttcttttcgccc
gccgagaagatgccgcttgtcgagatcatccgcggcaagaaaacaagcgacgaggcgctg
gcggtcacgctggactttgtgcaggcgatcaggaagacgcccatcgtcgtcaatgacggg
cgcggcttcttcacctcgcgcttctgcatgaactacatcggcgagggcgagatcatgctg
acggaaggcattccggcggcgctggtcgagaatgcgggcaagcttgcgggcatgccggtc
gggccgctcgcgctcgcggacgagacggccatcgacctcggctggaagatccacaaggcg
gccgaaaccgacctcggcgacgcctatacgccgagcgccgccatcggcgtgatggaagcc
atgtacgtcaagaacgggcgcgcgggccgcaagaatggcaagggcttctacgagtatccc
gagggcgggccgaagacgctttgggcgggtctcgcggaccttttcccggtgaagcccgaa
agcgagtggccgagcatcgacgacctcaagaagcggctcctcttcgcgcaggcgctcgac
gcggtgcggaccatggaagacggcgtgctcaccgacccggaagacggcgatgtgggcggc
atcttcggcctcggcttcgcgccctacaccggcgggccgctgtcgatgctcgacggtatc
ggcatcgcgaatgccgtcgcggagtgcgagcggctcgccgcgagatatggcgagcggttc
tcgccgccgaagctgttgcgcgacatggcggcggaagggcggacgttctacccggcggcg
aaggctgctgcttag

DBGET integrated database retrieval system