KEGG T01353: Rvan

Rhodomicrobium vannielii: Rvan_0651

Entry

Rvan_0651 CDS T01353

Definition

2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

rva Rhodomicrobium vannielii

Pathway

rva00020	Citrate cycle (TCA cycle)
rva00310	Lysine degradation
rva00380	Tryptophan metabolism
rva01100	Metabolic pathways
rva01110	Biosynthesis of secondary metabolites
rva01120	Microbial metabolism in diverse environments

Module

rva_M00009	Citrate cycle (TCA cycle, Krebs cycle)
rva_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:rva00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:rva00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:rva00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh HTH_18

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

728976..731945

AA seq 989 aa
MVIEVRRENLNEAFARTSFLHGANAAYIEDLYERFQENPGSVTADWRAFFTDLKERRGTV
DAEALGPSWKPKNGHSDEDGDILNALAADWGPEEGLPINRRIQAKAQQHGVEITREEAFR
ATRESVRAIMLIRAYRVNGHLIGNLDPLHITPPGSHPELDPKTYGFTAADLDHQIYIDNV
LGLETATLRQIIEILKRTYSGTIGFEFMHISSPEQKLWIQERIEGPDKEVEFTALGKKAI
LTKLVHAEGFERFLDKKYTGTKRFGLEGGEAAIPALEQIIKRGGQLGVKEIVIGMPHRGR
LNVLTNVMGKPFRALFHEFKGGSANPEDVEGSGDVKYHLGVSSDREFDGNSVHLSLTANP
SHLEIVDPVVLGKVRAKQDQLGDKTRSEVLPLLMHGDAAFAGQGVVAECFGLSGLKGHRT
GGSIHFIVNNQIGFTTAPRFSRSSPYPSDIARMIEAPIFHVNGDDPEAVVYCARVATEFR
QRFHKPVVIDMICYRRHGHNEGDEPSFTQPLMYKKIRQQQSVVSIYSKRLADENLVKEEE
AEKLKSTFWDKLEQEFIASESYRPNKADWLDGRWSSITLPEEGPRRGNTGVDLDKLRRIG
EKLTELPKGFTAHKTIERFLANRRKTIEEGKGIDWSMAEALALGTLLDEGYPVRLSGQDV
ERGTFSQRHAVLTDQENEEQFTPLNHLSDTQARIEIVNSMLSEEAVLGFEYGYSLAEPNA
LVLWEAQFGDFANGAQVVIDQFLASGERKWLRMSGLVLMLPHGYEGQGPEHSSARLERYL
QLSAEDNWQVANCTTPANYFHILRRQLHRSFRKPLILMTPKSLLRHKRVVSSLDRFGSGT
TFHRVLWDSAQVGKSETVKLVRDEAIKRVVLCTGKVYYDLFEERESRGTNDIYLMRLEQL
YPFPARALIQELSRFPNAEIVWCQEEPKNQGAWTFVESNIEWVLDHIGAETRRPRYVGRP
ACASTAAGLMSKHTAELHAFLDEALTVLG

NT seq 2970 nt +upstreamnt +downstreamnt
atggtgatcgaagtgagacgggaaaacctcaacgaagcgttcgcgaggacatcgtttctg
cacggtgcgaatgcggcctatatcgaagacctctacgagcgttttcaggagaacccgggg
tctgttactgccgactggcgcgcctttttcaccgatctgaaagaacgccgcgggaccgtc
gacgccgaggctcttggtccgtcgtggaagccgaaaaacggacatagcgacgaggatggc
gacatcctgaacgcgctcgccgccgactgggggccggaagagggccttccgatcaaccgc
cgcattcaggcgaaggcccagcagcacggcgtcgaaatcacccgcgaggaggcgttccgg
gccacgcgcgaaagcgtacgcgcgatcatgctcatccgcgcctaccgcgtgaacggccat
ctcatcggcaatctcgacccgctgcacatcacccctcccggttcgcacccggaacttgat
ccgaagacctacggcttcaccgccgccgacctcgatcaccagatctacatcgataacgtg
ctcggcctcgaaaccgcgaccctgcgccagatcatcgagatcctgaagcgcacctatagc
ggcaccatcggcttcgagttcatgcacatctcctcgccggagcagaagctctggattcag
gagcgcatcgaaggccccgacaaggaagtcgagttcacggcgctcggcaagaaggcgatc
ctcacgaagctcgtccatgccgaggggttcgagcgtttcctcgacaagaaatacacaggc
acgaagcgcttcggccttgaaggcggcgaggcagcgattcccgcgctcgaacagatcatc
aagcgcggcggccagctcggcgtaaaggaaatcgtcatcggcatgccgcatcgcggccgc
ctcaacgtgctcaccaacgtgatgggcaagccgttccgcgcgctgttccacgagttcaag
ggcggctccgccaaccccgaggacgtcgaaggctcgggcgacgtgaagtatcaccttggc
gtgtcgagcgaccgcgagttcgacggcaattccgtgcatctctcgctcaccgcgaacccg
tcgcatctcgaaatcgttgaccccgtcgtgctcggcaaggttcgcgcgaagcaggaccag
ctcggcgacaagacgcgctcggaggttctcccgcttttgatgcacggcgatgccgccttc
gcggggcagggcgtcgtcgcggagtgcttcggcctctccggcctgaaggggcaccgcacc
ggcggctcgatccacttcatcgtcaacaaccagatcggttttaccaccgcgccgcgcttc
tctcgctcatcgccatatccgtcggacatcgcgcgcatgatcgaggcaccgatattccat
gtgaacggcgacgatccggaagccgtggtctactgcgcgcgcgtggcgactgaattccgc
cagcgcttccacaagccggtcgtgatcgacatgatctgctaccggcggcacggccataat
gagggcgatgagccgtccttcacgcagccgctcatgtacaagaagatccgccagcagcag
agcgtggtgtcgatctactcaaagcggctcgcggatgagaacctcgtcaaggaggaagag
gccgagaagctgaaatctaccttctgggacaagctcgaacaggagttcatcgcgtccgaa
agctatcggccgaacaaggccgactggctcgatgggcggtggtcctcgatcacgctgccc
gaggaaggcccgcgtcgcggcaacaccggtgtcgatctcgacaagctgcgccgcatcggc
gaaaagctgaccgagttgccgaaaggcttcacagcgcacaagacgatcgagcgcttcctc
gccaaccgccgcaagacgatcgaggaaggcaagggcatcgattggtccatggcggaggcg
ctcgccctcggtacgctcctcgatgaaggctacccggttcgcctgtcgggtcaggacgtg
gaacgcggcaccttctcgcagcgccacgcggtgctcaccgatcaggaaaacgaggagcag
ttcacgccgctgaatcacctgtccgacacgcaggcgcgcatcgaaatcgtgaattcgatg
ctgtccgaggaggctgttctcggcttcgaatatggctacagcctcgcggagccgaatgcg
ctcgtgctctgggaggcgcagttcggcgacttcgcgaacggcgcgcaggtcgtcatagac
cagttcctcgcgagcggcgaacgcaaatggctgcgcatgtcgggcctcgtgctgatgctg
ccgcacggctatgaagggcaggggccggaacattcctccgcgcgcctcgaacgctacctt
cagctttccgccgaggacaattggcaggtcgcgaactgcaccacgcccgcgaactatttc
cacatcctgcgtcgccagcttcatcgcagcttcaggaagccgctgatcctgatgacgccg
aagtcgctcctcaggcacaagcgcgtggtctcgtcgctcgaccggttcggctcgggaacg
acgttccatcgcgtgctctgggacagcgcgcaggtcggcaagagcgagacggtcaagctc
gtccgcgatgaagccatcaagcgcgtcgtgctctgcaccggcaaggtctattacgacctg
ttcgaggagcgcgagagccgcggcaccaacgatatctacctgatgcgccttgagcagctt
tacccgttcccggcgcgcgcgctgattcaggagctgtcgcgcttcccgaacgccgaaatc
gtctggtgtcaggaagagccgaagaatcagggtgcctggacgttcgtcgagagcaacatc
gagtgggtgctcgatcacataggcgcggaaacgcggcgcccccgttatgtcgggcggcct
gcctgcgcgtcgaccgccgccggtttgatgagcaagcatacggcggagttgcacgcgttc
ctcgacgaagctttgacggtgctgggctag

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RVA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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