KEGG   Rhodomicrobium vannielii: Rvan_1701Help
Entry
Rvan_1701         CDS       T01353                                 

Definition
pyridoxal-phosphate dependent TrpB-like protein
Orthology
K06001  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
rva  Rhodomicrobium vannielii
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:rva00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Rvan_1701
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rvan_1701
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Rvan_1701
Enzymes [BR:rva01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Rvan_1701
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(1863250..1864614)
Genome map
AA seq 454 aa AA seqDB search
MSNQLKYVLDETQIPKFWYNLTADLPVPLPLVLHPGTKQPAGPADLEPLFPMALIEQEVT
SEREIEIPEPIRDVYRMWRPSPLYRARRLEQALGTPAKIYYKNEGVSPAGSHKPNTAVPQ
AWYNKEAGIQRLSTETGAGQWGASLAFAGALFGIDVTVFQVRVSYDQKPYRRALMETYGA
RCIASPSDQTDSGRAMLALNPTSPGSLGMAISEAVEIAAKDPAVKYALGSVLNHVMLHQT
VIGQEAIKQFEMAGDDPDVVIGCTGGGSNFAGIAFPFLGLQLRGGRKRRIIAVEPASCPT
LTRGTYAYDFGDTAHLTPLMKMHTLGSTFMPPATHSGGLRYHGMAPMVSHVHELGLIEAR
AYHQKACFDAGVQFARCEGIVPAPESTHAVRCAIDEALRCKAEGKAETILFNLSGHGHFD
MGAYINYFEGRMIDQNYDEGALATALSELPAVAA
NT seq 1365 nt NT seq  +upstreamnt  +downstreamnt
atgagcaaccaactcaaatatgttctcgacgaaacgcaaatcccgaaattctggtacaac
ctcacggccgacctgccggtgccgctgccgctcgtcctgcatccgggcaccaaacagccc
gccggacctgccgaccttgagccgctgtttccgatggcgctcatcgagcaggaggtgacg
agcgaacgcgaaatcgagatccccgagccgatccgggatgtctaccgcatgtggcggccg
tcgccgctctaccgtgcgcgccgtctcgaacaggcgctcggcacgcccgcgaagatctac
tacaagaacgagggcgtctcgcccgcggggtcgcacaagccgaataccgccgtgccgcaa
gcctggtataataaggaagcgggcatccagcgcctttccaccgagacgggcgcgggacaa
tggggcgcgtcgctcgcgttcgcgggcgcattgttcggcatcgacgtgacggtgtttcag
gtccgcgtgtcctacgaccagaagccgtatcgtcgcgcgctgatggaaacctacggcgcg
cgctgtatcgcctcgccgtcggaccagaccgactccggccgcgccatgctcgcgctgaac
ccgaccagccccggctcgctcggcatggctatttcggaagcggtggaaatcgccgccaaa
gacccggctgtgaaatatgcactcggctccgtgctgaaccacgtcatgttgcatcagacg
gtcatcggccaggaagccatcaagcagttcgaaatggccggcgatgacccggatgtcgtg
atcgggtgcacgggcggtggctcgaacttcgcgggcatcgcgttcccgttcctcgggctg
caactgcgcggcggccgcaaacggcgcatcatcgcggtggagcctgcctcctgcccgaca
ttgacgcgcggcacctacgcctacgacttcggcgacaccgcgcacctgacgccgctcatg
aaaatgcacacgctcggctcgacgttcatgccgcccgcgacgcattccggcggcctgcgc
tatcacggcatggcgccgatggtttcgcatgtccatgaactgggcttgatcgaggcgcgc
gcctatcaccagaaggcatgtttcgatgcgggcgtgcagttcgcgcgctgtgaaggcatc
gtgcccgcgccggagtcgacccacgccgtgcgttgcgcgatcgacgaagcgctgcgctgc
aaggcggagggcaaggccgagacgatcttgttcaacctgtcgggccacggccatttcgac
atgggcgcttacatcaactacttcgaaggccggatgatcgatcagaattacgacgaaggc
gcgcttgctacggctctatccgaactgcccgccgtggccgcgtga

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