KEGG T01353: Rvan

Rhodomicrobium vannielii: Rvan_2121

Entry

Rvan_2121 CDS T01353

Definition

UDP-N-acetylmuramyl tripeptide synthetase

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

rva Rhodomicrobium vannielii

Pathway

rva00300	Lysine biosynthesis
rva00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rva00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:rva00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase VWA_2 LpxD

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2314274..2315641)

AA seq 455 aa
MLFAALSGTKADGMAYAKAAEAAGAVAVLAGETANAEGLSLPILRAAEPRRALALLAARF
YRAQPDIIAAVTGTNGKTSVAAFLRQIWATAGHDAASLGTIGIITNAGERPLSHTTPDPV
ALHKALADLANEGVTHLALEASSHGLDQHRLDGVRFSAGAFTNITRDHLDYHPTFEDYFN
AKMRLFRDLLPSGAPAIIDADGDHADDVVGTARAKKLDVMTVGERGAALCLKGVERDGFR
QRLSIIYRGRLFTVLLPLAGAFQVSNALVSAGLALGLGSSAGGVFEALETLRGAKGRLDY
VGETSAGAPIFVDYAHTPDALVKALEALRPYVTGRLHVVLGCGGDRDRGKRPEMGRAATA
NADIVYVTDDNPRSEEPAAIRAAIMAAAPGATEIDGRADAIAIAIGNLERGDLLLVAGKG
HETGQIVGTKVIPYSDHEAVAAALAAIGERRASHA

NT seq 1368 nt +upstreamnt +downstreamnt
atgctgttcgctgcgctttcgggcacgaaggcggacggcatggcttacgcaaaggcggcg
gaagctgccggtgcggtggccgtgcttgcgggcgaaacggcaaacgccgaggggctttcc
ctgcccatcctccgcgccgccgagccgaggcgcgcgctggcgcttctcgccgcccggttc
tatcgcgcgcagcccgacatcatcgccgccgtcacgggcacgaacggcaagacgtccgta
gcggcattcctgcgccagatatgggcgacagcgggccacgacgctgcgagcctcggcacc
atcggcatcatcaccaatgcgggcgagcggcccctgtcgcatacgacgcccgatccggtc
gcgctgcataaggcgctggcggatctcgcgaacgagggcgtgacgcatctcgcgctcgaa
gcgtcgagccacggcctcgaccagcaccggctcgacggcgtgcgcttctcggcgggcgcg
ttcacgaacatcacgcgcgaccaccttgattatcacccgaccttcgaagattatttcaac
gcgaagatgcgcctgttccgcgatctcctgccctccggcgcgcccgcaatcatcgacgcg
gatggcgatcacgcggacgatgtcgtgggcacggcccgcgcaaagaagctcgacgtgatg
accgtgggcgaacgcggtgccgcgctttgcctgaagggcgtcgagcgcgacggcttccgc
cagcgactttcgatcatctatcgcgggcggctgttcaccgtgctgctgccgcttgcgggc
gcgttccaggtgtcgaatgcgctggtgtcggcggggctcgcgctcgggctcggcagttcg
gcgggaggcgtcttcgaggcgctggaaacgctacgcggcgcgaagggtcggctcgactat
gtcggcgagacgagcgcaggcgcgccgatattcgtagactatgcccacacgcccgacgcg
ctggtgaaggcgctggaagcgctccgcccttacgtgaccggtcggctgcacgtagtgctc
ggctgcggcggcgatcgcgaccggggcaagcgtcccgagatgggccgcgcggcgaccgcc
aacgccgatatcgtttatgtcacagacgacaatccgcgcagcgaggaaccggccgcgatc
cgtgccgcgatcatggcggcagcaccgggcgcgaccgagatcgacggacgcgcggatgcc
atcgccatcgccatcggcaaccttgagcggggcgatttgttgcttgtcgctggcaagggc
cacgaaacggggcagatcgtcggcaccaaggtcattccctattccgatcatgaggcggtc
gctgctgcgctcgccgccatcggagaacggagagcaagccatgcctga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RVA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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