KEGG   Rhodomicrobium vannielii: Rvan_2232Help
Entry
Rvan_2232         CDS       T01353                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rva  Rhodomicrobium vannielii
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rva00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rvan_2232
Enzymes [BR:rva01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rvan_2232
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rvan_2232
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2451197..2452081
Genome map
AA seq 294 aa AA seqDB search
MPELPEVEIIRRGLAPAMEGAAFSAVTLNRADLRFPFEPRFVERLRGQRIARLTRRAKYI
VAEADSGLCLAMHLGMTGRFTIEHKADGAVTPGSFYYEHAANALHDHVVFAMSNGEVIRY
NDPRRFGYMTLFGAGEMAAHPLFRALGIEPLSDALTPDYLAARAAGKAQALKAFLLDQRI
IAGLGNIYVCEALFRAGLPPDAEAGALGVGRRGKAAAARLCAAIKAVLEDALLAGGSSIR
DYRHANGDGGHFQEKFDVYGRGGEPCHNKCGSFIERKAQQGRSTFFCPHCQAKI
NT seq 885 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaattacccgaagtcgaaatcatccggcgcggcctcgcccctgccatggagggc
gcggcgttttccgccgtcacgctcaaccgcgccgaccttcgctttccgttcgagccgcgt
ttcgtcgaacgcctgcgcgggcaacgcatcgcgcgcctcacgcggcgggcgaaatacatc
gtggcggaagcggatagcggcctttgcctcgccatgcatctcggaatgacgggccgcttc
accatcgagcacaaggcggatggcgcggtgacgcccggctcgttctattacgagcatgcc
gccaacgcgctccacgaccacgttgttttcgcaatgagcaacggcgaggtgatccgctac
aacgacccccgccgcttcggttacatgacgctgttcggggcaggcgagatggccgcgcat
ccgctttttcgcgcgctcgggatcgagccgttgtccgatgcgctgacgccggattatctt
gcggcgcgcgcggcggggaaggcgcaggcgctcaaggcgttcctgctcgaccaacgcatt
attgcagggctcggcaacatctatgtatgcgaggcgctgtttcgcgcgggcttgccgccg
gacgcggaggcgggcgcgctcggtgtcggcaggcgcggcaaggcggcggccgcgcggctc
tgcgccgcgatcaaggccgtgctcgaagacgcgctgctcgcgggcggctcctcgatccgc
gactatcgccacgccaacggcgacggcggccatttccaggagaagttcgacgtgtatggg
cgtggcggcgagccgtgtcataataagtgcggctcattcatcgaaagaaaagcccaacaa
gggcgctcgacttttttctgtccgcactgtcaggcaaagatctga

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