KEGG   Rubrobacter xylanophilus: Rxyl_1497
Entry
Rxyl_1497         CDS       T00368                                 
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
  KO
K01929  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
Organism
rxy  Rubrobacter xylanophilus
Pathway
rxy00300  Lysine biosynthesis
rxy00550  Peptidoglycan biosynthesis
rxy01100  Metabolic pathways
rxy01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rxy00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Rxyl_1497
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rxyl_1497
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Rxyl_1497
Enzymes [BR:rxy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.10  UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
     Rxyl_1497
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase MeaB CbiA
Other DBs
NCBI-ProteinID: ABG04459
UniProt: Q1AVW9
Position
complement(1516099..1517463)
AA seq 454 aa
MREATLSEISRAIGARLHGTDGGERAHGAAVDSRAVRGGELFFALRGRLDGADFAPDARA
RGAVAAVADRPLEVPTLVVEDPLRALQELARWSLRREASATVVGITGTVGKTTTKDALAT
ILRSAGRKITATQGNLNNEIGLPLTVLNAAPDTEVMVLEMGATHPGDIAFLCGIARPHVG
VLTAISPVHLDSFGSLQKLAETKGELARSLPEDGAFVSPVGVPEAAVGGGRAFGRHITFG
DEGASLWASGVEETEEGLRFTVHAFGESAAVRAPVHGTHLVRPLLAATGGALALGVALEE
CARGLSRLRRTGLRGDLLRLRDDILLYDDSYNASPAAMAAVLRYGARQASSSGRRLVAVL
GGMFELGPGAREYHREAGRLAAEVGVDLLVCVGEEAGWYAEAFDGEKVLYRDAGEAAREL
PHLLRPGDYVLVKGSRGVRLDTLTGRLKESLAVV
NT seq 1365 nt   +upstreamnt  +downstreamnt
gtgagggaagcgactctctcggagatctcacgggccatcggcgcccggctgcacggtacg
gacggcggagagcgggcgcacggggccgccgtcgactcgcgggcggtgcgcggaggggag
ctcttcttcgccctccgcggccggctggacggcgcggacttcgcccccgacgcccgcgcc
cgcggggcggtggcagcggtggcggaccggccgctcgaggtgcccacgctggtggtggag
gaccctctgcgggccctgcaggagctcgcccggtggtcgctccgccgggaggcctccgcc
acggtggtggggataaccggcacggtgggcaagaccaccaccaaggacgcgctggcgacc
atcctgcgctcggcgggcaggaagatcaccgccacccaggggaacctgaacaacgagatc
gggctccccctcacggtgctcaacgccgccccggacaccgaggtgatggtgctggagatg
ggggccacccatccgggcgacatagcctttctctgcggcatcgcccgcccgcacgtgggc
gtgctgaccgccatctccccggtgcatctggactccttcggcagcctgcagaagctcgcc
gagaccaagggggagctggcccggtccctgccggaggacggtgccttcgtctcgccggtg
ggcgtgccggaggcggccgtcggcgggggacgggccttcgggcggcacataaccttcggg
gacgagggcgcctccctgtgggcctccggcgtggaggagaccgaggaggggctgcgcttc
accgtgcacgccttcggggagtccgccgccgtgcgcgccccggtccacggcacgcacctg
gtgcgcccgcttcttgccgccaccggcggggcgctcgccctcggggtggcgctcgaggag
tgcgcccggggcctctcccgcctgcggcgcacgggcctgcgcggcgacctcctgcgcctc
cgggacgacatcctgctctacgacgactcctacaacgcctcgcccgccgccatggccgcc
gtgctgcgctacggggcccggcaggcctcctcctccgggcgcaggctcgtcgccgtgctc
ggcggcatgttcgagctgggaccgggggcccgcgagtaccaccgggaggcgggacggctc
gccgccgaggtcggggtggaccttctggtctgcgtcggggaggaggccggctggtacgcg
gaggccttcgacggcgagaaggtcctctacagagacgccggggaggcggcgcgggagctc
ccgcacctcctgcgcccgggggattacgttctggtaaagggttcgaggggcgtgcggctg
gacaccctcaccgggagactcaaggagagcctggccgttgtttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (35)   

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