KEGG   Rubrobacter xylanophilus: Rxyl_1786Help
Entry
Rxyl_1786         CDS       T00368                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rxy  Rubrobacter xylanophilus
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rxy00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Rxyl_1786
Enzymes [BR:rxy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Rxyl_1786
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Rxyl_1786
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1809184..1809981
Genome map
AA seq 265 aa AA seqDB search
MPELPDVEVLKGRLERTSLGRRISRVEVRDGRVVGEVSARGLREALEGRSLRRVHRHGKN
LFAGVEGGGWVLMHFGMAGGLSHLPGTEEEPPHVRLLLGFDGGDRLAFTDRRALGRVHPI
RDPESFVREKGLGPDALRVDYPSFRERLGGRRGAVKSVLMNQGVVAGLGNIYSDEVLFRA
RLHPRTGADRLGEEDIRRLFEATGGVLQTAIDRGADPEALPGSFLLPRRREGARCPRGNG
EIRRLRIAGRTAYYCPACQPGRRES
NT seq 798 nt NT seq  +upstreamnt  +downstreamnt
atgcccgagcttccggacgtggaggtcttgaagggtcggctggagagaacctcgctgggg
cggcggatctcgcgcgtggaggtgagggacggcagggtagttggggaggtctccgcccgc
gggctgcgggaggccctggagggccgcagcctccggcgcgtccaccgccacggcaagaac
ctcttcgccggcgtcgagggcgggggctgggtgctgatgcacttcggcatggcgggcggc
ctgagccacctgccgggtacggaggaggagccgccgcacgtgaggctgctcctcggcttc
gacggcggggatcgcctcgccttcaccgaccgccgggcgttggggagggtgcatcccatc
cgggacccggagagcttcgtgcgggagaaggggctgggccccgacgcgctccgcgtggac
tacccctccttccgggagcggctcggcgggaggcggggcgcggtgaagtccgtgctgatg
aaccagggcgtcgtcgcggggctggggaacatctactccgacgaggtgctcttccgggcc
cgcctccacccgcggacgggcgcggaccgcctcggggaggaggacatccggcggctcttc
gaggccaccggaggcgtgctgcagaccgccatagaccggggggcggatccggaagcgctt
ccgggctccttcctgctcccccgccggcgcgaaggagcgcgatgcccgcgggggaacggg
gagatccgcagactgcgcatcgccgggcgcaccgcctactactgccccgcgtgccagccc
gggagacgggagagctga

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