KEGG T00368: Rxyl

Rubrobacter xylanophilus: Rxyl_2305

Entry

Rxyl_2305 CDS T00368

Definition

UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)

Orthology

K01928

UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]

Organism

rxy Rubrobacter xylanophilus

Pathway

rxy00300	Lysine biosynthesis
rxy00550	Peptidoglycan biosynthesis

Class

Metabolism; Amino acid metabolism; Lysine biosynthesis [PATH:rxy00300]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:rxy00550]

SSDB

Motif

Pfam:

Mur_ligase_M Mur_ligase_C Mur_ligase ADH_zinc_N_2 MoCF_biosynth

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2315760..2317298)

AA seq 512 aa
MLRGSFEGVSARCAPLATLPGMAVEREELRRVLGVEVPAGVGRVCGVTHDSREVEPGFAF
VAVPGFKRDGVEFVPEALRRGAALVVAEREVPEAPVAVVPDARAALAALACAFHGHPSRR
MEVYGVTGTNGKTTTCYALHAVLAGAFGEERCGLMTTAEVVAGGERRPAVRTTPEATEVQ
AALAGMRERGVERVAMEVSSHGIALRRVEGIRFAGAVFTNLSRDHLDLHGTMEEYYRTKR
RLFLWARGPKLSNADDAWGRRLAGEVEGVRTFGSAVGADYRIEGVRPSGAGTRFVLRRGE
EALRIEVPLFGDYNVQNAAGAAALALELGVPGETVARALRGMPQVPGRFERVGGPGFEVI
VDYAHTDVGLEAVLRVAREVARRGRPGRVICVFGAAGERDGAKRPLMGRVASRLADRGII
TTDDAYSEDPEKIAREVAAGVEDGRLEIVLDRREAIRRALSEAGEGDVVVVAGKGHERVQ
HLPWGDVPFHDATVIREILEERDPCRERTRER

NT seq 1539 nt +upstreamnt +downstreamnt
ttgttgcgaggatctttcgagggtgtttcggcgaggtgcgcgccgcttgctacactaccg
ggcatggcggtggagcgcgaggagctgaggcgggttttgggcgtggaggtgcccgcgggc
gtggggagggtatgcggggtcacccacgactcgcgggaggtcgagccgggcttcgccttt
gtggcggtaccgggcttcaagcgggacggggtggagttcgtgccggaggcgctgcgccgg
ggggcggcgctcgtggtcgcggagcgggaggttcccgaggctcctgtcgcggtggtgccc
gatgcgagggcggcgctcgcggccctcgcctgcgcctttcacggccatccctcgcgccgg
atggaggtctacggggtgaccgggacgaacgggaagaccaccacctgctacgcgctgcac
gcggtgctcgcgggggcgttcggggaggagcgctgcggcctcatgaccacggcggaggtg
gtcgccggcggcgagaggagacctgcggtcaggacgaccccggaggccaccgaggtgcag
gcggcgctcgccgggatgcgcgagcggggggtggagcgggtggcgatggaggtctcctcg
cacgggatcgcgctgcggcgggtggaggggatccgctttgcgggcgccgtcttcaccaac
ctcagccgggatcacctggacctgcacggcaccatggaggagtactaccggaccaagcgg
cggctcttcctctgggcccgggggcccaagctctcgaacgccgacgacgcgtggggccgg
cggctggccggggaggtggagggggtgaggaccttcggctccgccgtgggggcggactac
aggatcgagggcgtacgcccctcgggagcgggcacgcgcttcgtgctgcggcgcggggag
gaggcgctccggatcgaggttccgctcttcggggactacaacgtgcagaacgcggccggg
gccgcggcgctcgccctggagctcggggtgcccggggagaccgttgcccgggcgctgcgc
gggatgccgcaggttcccgggcgcttcgagcgggtgggcggtccgggcttcgaggtgatc
gtggactacgcccacaccgacgtggggctggaggccgttctgcgggtggcgcgcgaggtg
gcccgccgggggcggccggggagggtcatctgcgtcttcggggcggccggggagcgggac
ggggccaagcggccgctcatggggcgggtggcctcccggctcgccgaccgcggcatcatc
accaccgacgatgcctactcggaggatcccgagaagatcgcccgggaggtcgccgccggc
gtcgaggatgggcgcctcgagatcgtgctggaccgccgggaggcgatccggcgggcgctc
tcggaggcgggggagggcgacgtggtcgtcgtggccggcaaggggcacgagcgggtgcag
caccttccctggggggacgtgccgttccacgacgccaccgtgatacgcgagatcctggag
gagcgtgatccttgcagagagagaacaagagagaggtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RXY (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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