KEGG   Stenotrophomonas acidaminiphila: AOT14_01890
Entry
AOT14_01890       CDS       T04107                                 
Name
(GenBank) ATP-dependent DNA helicase RecG
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
sacz  Stenotrophomonas acidaminiphila
Pathway
sacz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sacz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AOT14_01890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sacz03019]
    AOT14_01890
   03400 DNA repair and recombination proteins [BR:sacz03400]
    AOT14_01890
Enzymes [BR:sacz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AOT14_01890
Messenger RNA biogenesis [BR:sacz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AOT14_01890
DNA repair and recombination proteins [BR:sacz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AOT14_01890
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Pribosyltran AAA_30 Ish1
Other DBs
NCBI-ProteinID: ALJ26650
UniProt: A0A0S1AV69
Position
227239..229317
AA seq 692 aa
MAYDPKRALKLLRIGSGRADATFRDGQEDAIRHIVEGKGRLLVVQKTGWGKSFVYFIATK
LLREAGAGPALLISPLLALMRNQIAAAERMGVRAATINSDNQDEWKSVEAKLRRNEVDIL
LIAPEKLGNDWFNTEVLAGIAGQISLMVIDETHCISDWGHDFRPHYRLLERIARTLPANL
RLLATTATANDRVMEDLVAVLGPNMEVLRGDLNRSSLTLQTMRLPSQAVRLAWIAQQLSS
LPGHGIIYTLTIRDANQLADWLKAQGFAVEAYTGKTGDRREELEQALQENKVKALVATTA
LGMGYDKPDLAFVIHFQMPGSVVAYYQQVGRAGRALESAYGVLLSGDEEEGITDWFIRSA
FPTRQEVDEVLGALNEAPEGLSIPDLMTCVNMSKGRIEKTITALSLESPAPIAKQGTKWQ
LTAAELGDEFWARADRLTKLRRAELQQMQEYVSRPFGQHMGFLIDALDGDSSTVSPPSLP
PLSEDVDQLLVREAEEFLCRTSLPIEPRKKWPVGGMPQYGIHTASTITYQAQPGKALCVW
GDAGWGGLVRQGKYHDGHFSDDLVAACVKMIKEWNPQPSPTWVTCVPSLRHPELVPNFAQ
RLAAALGLPFHMVIVKTDARPEQKTMANSTQQARNIDGSLALNGQPIPRGPVLLVDDMVD
SRWTLTVSAWLLRKSGSGAVWPMALSQTGHDE
NT seq 2079 nt   +upstreamnt  +downstreamnt
gtggcctacgacccaaaacgcgcgctgaaacttctccgcatcggctccggacgcgccgat
gccactttccgcgacggccaagaagatgccattcgtcacatcgtcgaaggcaaagggcgc
ttgctggtcgtgcagaaaaccgggtggggtaagagctttgtctacttcatcgcgaccaag
ttgctgcgggaagctggagccggcccggcgttattgatctcgccgctgctggcgctgatg
cgaaaccagatcgcagcggcagaacggatgggggttcgcgccgccaccatcaactccgat
aaccaggatgaatggaaatcggttgaagccaagctgcgtcgaaacgaagtggacattctg
ctgatagcgccagaaaagctgggtaacgactggtttaacacagaggttctagctggtatc
gcagggcagatttcgctgatggttatcgatgagacccattgcatttccgattggggtcac
gacttccgtcctcactaccgactgctggaacgtatcgccagaacgcttccagccaatctg
cggctgctggccacaacggcaacagcaaacgatcgcgttatggaagaccttgtggctgtg
ctcggccccaacatggaggtgctgcgcggtgacctgaatcgaagttctctgacgctgcaa
acgatgcgtttacccagtcaggctgtccgtctggcatggatcgcgcagcaactcagttca
cttccagggcacggcatcatttacacactcactatccgagatgccaatcaactggcggat
tggctcaaggcccaaggctttgctgtagaagcctatacaggtaagacaggtgatcggcgt
gaggagctagagcaggctctgcaggagaacaaggttaaggcacttgtagcgaccaccgca
ttgggtatgggctacgacaagccggatctggcattcgttatccattttcagatgccaggc
tcagttgtcgcctattaccagcaagtagggcgcgcaggaagagcgctggaatctgcatat
ggcgtgctcttgagcggagatgaagaagaaggaattaccgactggtttatccgtagcgcg
ttcccaactcgccaagaggtagacgaggtcctgggggctcttaatgaggcaccggaagga
ctttcaatacctgacctcatgacctgcgtgaacatgagcaaaggtcgcatcgagaagact
atcacggcactgtctctcgaatctccagcgccgatcgccaagcaaggtacgaagtggcag
cttactgcagccgagctaggagacgaattctgggcgcgagcagaccggctcaccaaattg
aggcgtgccgaactccagcaaatgcaggaatacgtctctcggcctttcgggcagcacatg
ggctttctgattgatgcgcttgatggtgattcaagcaccgtcagcccaccgtcgttgccg
ccgctgtcagaagacgtcgatcagttgctggttcgggaagccgaggagtttctttgtcgc
acaagcctccccatcgagcctcgcaaaaaatggcctgtggggggaatgccgcagtacgga
attcacaccgcatccaccattacctatcaagcgcagccaggcaaagccctctgcgtctgg
ggtgatgccggttggggcggcttggttcgacaaggtaagtaccacgacggccacttctcc
gatgacctcgttgctgcgtgcgtgaagatgattaaggagtggaatccgcagccgagcccg
acctgggtgacctgcgttccttcgcttcggcatcccgaattggtgccgaatttcgcgcaa
cgcttggctgctgcgctgggtctgccgtttcatatggtcatcgtaaaaacagacgcacgg
cccgaacagaaaacgatggcaaacagtacacaacaggcgcgcaacattgatggctcgctc
gcactcaacggccagcccattcctcgcggaccagtcctcctggttgatgacatggtcgac
tcgcgctggacgctaacggtgtctgcatggctgttgcgcaaaagcggtagtggcgcggtt
tggcctatggccctttcacagacggggcacgacgaatga

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