KEGG   Simiduia agarivorans: M5M_12860Help
Entry
M5M_12860         CDS       T02281                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
saga  Simiduia agarivorans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:saga00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    M5M_12860
Enzymes [BR:saga01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     M5M_12860
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     M5M_12860
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
2819599..2820414
Genome map
AA seq 271 aa AA seqDB search
MPELPEVETTRAGIAPHIQRKKVKTLVVRNPALRWPVPDDLAARVTGQTLLDVSRRGKYL
LLRFKAGHLLIHLGMSGSLRIIQATEPPGYHDHVDLVLSGDRALRFHDPRRFGCWLWAEG
DVNAHKLLASLGPEPLSDAFDADYLYTACRGKKANIKNVIMDSHVVVGVGNIYANEALFL
AGIRPRRAAGSLTRAQTEGLVSHIKAVLARAIESGGTTLRDFVGGDGKPGYFQQTLMVYG
RGGEACKLCHTLLKEVRVNNRATVYCAQCQT
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcctgagttacccgaagttgaaaccacccgcgcgggcattgcacctcatatccagcgc
aaaaaagtaaaaaccctggtggtgcgcaatccggcactgcgctggccggtgcccgatgat
ctggcggccagagtgaccggacaaacgttgctcgatgtgagccgacgcggcaaatacctg
ttgctcagattcaaggccggtcacttgctcattcacctcggtatgtctggcagcctgcga
attatccaggccactgagccgcctgggtaccacgatcatgtggacctggtgctgtccggc
gatcgggctctgcgctttcatgaccctcgccgttttggctgttggctctgggctgaaggc
gatgtgaatgctcacaaactgttggcgtccctgggcccggaaccgctttcagacgcgttt
gacgcagactatctgtataccgcctgccggggtaaaaaggccaatatcaaaaatgtcatc
atggacagccatgtggtggtaggcgtgggtaacatctacgccaatgaggcgttgtttctg
gctggcatccgaccgcgacgggccgcaggcagcctgacccgcgcccagaccgaaggtctg
gtttcgcacatcaaggccgtgctggcccgcgccattgagtcgggtggcaccaccttgagg
gactttgtgggcggcgacggtaagccagggtacttccagcaaaccctgatggtttacggc
cggggtggcgaagcctgcaagctgtgtcacactctgttaaaagaagttcgcgtgaataat
cgggccacggtatattgcgcccagtgccaaacttaa

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