KEGG   Simiduia agarivorans: M5M_14785
Entry
M5M_14785         CDS       T02281                                 
Name
(GenBank) ribosomal RNA large subunit methyltransferase J
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
saga  Simiduia agarivorans
Brite
KEGG Orthology (KO) [BR:saga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:saga03009]
    M5M_14785
Enzymes [BR:saga01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     M5M_14785
Ribosome biogenesis [BR:saga03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    M5M_14785
SSDB
Motif
Pfam: FtsJ Methyltransf_31 Methyltr_RsmB-F
Other DBs
NCBI-ProteinID: AFV00092
UniProt: K4KM36
Position
complement(3215109..3215732)
AA seq 207 aa
MARSKSSNRWLEEHVNDPYVKRAQVDGYRSRASYKLLELNEKDKLFRPHQVVMDLGSAPG
GWSQVAMKLVGEHGRVIASDILPMDAIAQVEFIQGDFTEDKVFDQIMATINSDAVDVVIS
DMAPNISGVNAADQASSMYLVELALDMARQVLRKKGSFVAKVFMGEGYDDYLKDVRESFD
KVVIRKPAASRARSREVYVVAKGFKGG
NT seq 624 nt   +upstreamnt  +downstreamnt
atggcccgctccaaaagcagtaatcgctggctggaagaacacgtgaatgacccctatgtg
aagcgggcccaggtggacggttatcgctcgcgcgccagctacaaactgctggaattgaat
gaaaaagacaaactcttccgcccgcaccaggtggttatggatctgggctcggcgcccggc
ggctggtcgcaggtcgcgatgaagctggtgggcgagcatgggcgggtgattgcctccgac
atactgcccatggatgccattgcccaggtggagtttatccagggcgacttcaccgaggac
aaggtgttcgaccagatcatggccaccatcaacagcgatgcggtagatgtggtgatttct
gacatggcgcccaacatcagcggggtcaatgccgccgaccaggccagctccatgtatctg
gtagaactggcactcgacatggcccgccaggtactgcgcaaaaaaggcagctttgtggcc
aaagtattcatgggcgaaggttatgacgactatcttaaagacgttcgcgaaagcttcgac
aaagtggtcatccgcaaaccggccgcatcgcgcgcacgctcgcgggaagtctacgtggtg
gcgaaagggtttaaagggggataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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