KEGG   Simiduia agarivorans: M5M_18535Help
Entry
M5M_18535         CDS       T02281                                 

Gene name
fadB
Definition
multifunctional fatty acid oxidation complex subunit alpha (EC:5.3.3.8)
Orthology
K01825  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Organism
saga  Simiduia agarivorans
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:saga00001]
 Metabolism
  Overview
   01200 Carbon metabolism
    M5M_18535 (fadB)
   01212 Fatty acid metabolism
    M5M_18535 (fadB)
  Carbohydrate metabolism
   00640 Propanoate metabolism
    M5M_18535 (fadB)
   00650 Butanoate metabolism
    M5M_18535 (fadB)
  Lipid metabolism
   00071 Fatty acid degradation
    M5M_18535 (fadB)
   01040 Biosynthesis of unsaturated fatty acids
    M5M_18535 (fadB)
  Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    M5M_18535 (fadB)
   00310 Lysine degradation
    M5M_18535 (fadB)
   00380 Tryptophan metabolism
    M5M_18535 (fadB)
  Metabolism of other amino acids
   00410 beta-Alanine metabolism
    M5M_18535 (fadB)
  Metabolism of terpenoids and polyketides
   00903 Limonene and pinene degradation
    M5M_18535 (fadB)
   00281 Geraniol degradation
    M5M_18535 (fadB)
  Xenobiotics biodegradation and metabolism
   00930 Caprolactam degradation
    M5M_18535 (fadB)
Enzymes [BR:saga01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.35  3-hydroxyacyl-CoA dehydrogenase
     M5M_18535 (fadB)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.17  enoyl-CoA hydratase
     M5M_18535 (fadB)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.2  Acting on hydroxy acids and derivatives
    5.1.2.3  3-hydroxybutyryl-CoA epimerase
     M5M_18535 (fadB)
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.8  dodecenoyl-CoA isomerase
     M5M_18535 (fadB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4073737..4075884
Genome map
AA seq 715 aa AA seqDB search
MIYSGKAITVRALDNGIAELCFDLADDSVNKFNQLTLAELKDATAAVAADKSIKGLLVTS
GKDCFIVGADITEFGANFSKSEEDIAAEVFETNKIFNAVEDLPIPTVTAINGVALGGGLE
MALATDYRVLAEGVKIGLPEVKLGIMPGFGGSVRLPRIIGADNAIEWIAGGSENRAEKAF
ADGAVDALVAPALLRDAAIDLLNRAISGELDYKAKRQEKLEKLKINDIESLMVFETAKGF
VAGKAGKHYPAPVTAVKSMQKNSTLGRDDALKVEAASIGKLAKTGAAASLVSLFLGDQML
MKKGKKQAAGAKKIEQGAVLGAGIMGGGIAYQSAYKGTPIMMKDIAQAGLDLGMGEAAKL
LSKLVERGRMTTDKMAKVLTAITPTLSYEGIDKADVVVEAVVENPKVKHAVLAEVEGKMR
ADAILSSNTSTISIDYLAQPLKRPENFCGMHFFNPVHKMPLVEVIRGAKTSDTAVAATVG
YALAMGKKPVVVRDCPGFLVNRILSPYMGCFMQMVNEGADFVQIDKVMEKFGWPMGPAYL
CDVVGIDTGVHAGETMSEGFPDRMKYDFKTASEVLYEAKRFGQKNGKGYYAYELDKKGRQ
KKVADESVWALLKDHVAPRKDVSDEEITERLMVSLCLEAVRCLEDGIVDSATELDMALIY
GIGFPPFLGGAIRYMESMGLANFVAIADKYAHLGGLYKVTDQLRAKAEAGQSYFA
NT seq 2148 nt NT seq  +upstreamnt  +downstreamnt
atgatttattcaggcaaggcgatcactgtacgcgcgctggacaatggcatagcggagctg
tgttttgatctggctgacgactccgtcaataaattcaaccaactgacgctggccgagctg
aaagatgccacggcggctgtggcggctgacaaaagcatcaagggcctgctggttaccagt
ggcaaagattgctttatcgtgggggccgacatcactgaatttggcgccaacttctccaag
tccgaagaagacatcgccgccgaggtgtttgaaaccaacaagatctttaatgcggtggaa
gacctgcctattcccaccgtgactgccatcaacggcgtggcgctgggtggcggtctggaa
atggccctggccaccgactaccgcgtgctggccgaaggcgtgaaaatcggcctgccggaa
gtgaagctgggcatcatgccgggctttggtggttctgttcgtctgccgcgcatcatcggt
gcggataacgccatcgagtggattgccggcggtagcgagaaccgtgcggaaaaagccttt
gccgacggcgctgtcgatgcgctggttgcaccggcattgctgcgcgatgcagcgatcgat
ttgctgaatcgtgccatcagcggcgagctggattacaaagccaagcgccaggaaaaactg
gaaaagctcaagatcaacgacatcgaatccctgatggtgtttgaaaccgccaagggcttc
gtagccggtaaagcgggcaagcattaccctgcgccggtaaccgccgtaaaatccatgcag
aaaaactccaccctgggtcgcgacgacgcacttaaagtagaagctgccagcattggtaag
ctggcaaaaaccggcgctgctgcaagcctggtaagcctgttcctgggtgaccagatgctg
atgaaaaaaggcaagaagcaagccgccggcgcgaagaaaatcgagcaaggtgctgtgctg
ggtgccggtatcatgggtggcggtattgcttaccagtcggcctacaaaggcacgcccatc
atgatgaaagacatcgcccaggcgggtctggatctgggcatgggcgaagccgccaagctg
ttgtccaaactggttgagcgcggtcgcatgaccaccgacaaaatggctaaagtactgacc
gccattacgccgacgctcagttacgaaggcatcgacaaagccgatgtggtggtggaagcc
gtggtggaaaaccccaaggtcaaacacgccgtgttggcagaagtggaaggcaaaatgcgc
gcggatgccattctgtcatcaaacacctccaccatttctatcgattatctggcgcagcca
ctcaagcgcccggaaaatttctgcggcatgcacttctttaacccggtgcacaagatgcca
ttggtggaagtgatccgcggtgccaaaacctccgacaccgccgtggcggcgaccgtgggt
tacgcactggccatgggcaaaaagcccgttgtagtccgcgactgccccggctttttggtg
aaccgcatcctgtcgccctacatgggctgctttatgcagatggttaacgaaggcgccgac
ttcgtgcagatcgacaaggtcatggaaaaattcggctggcccatgggccccgcttacctg
tgtgacgtggtgggtatcgacaccggtgtacacgccggcgaaaccatgagcgaaggcttc
cccgatcgcatgaagtacgacttcaaaactgccagcgaagtgctgtacgaggccaagcgt
tttggtcagaagaacggcaaaggctattacgcttacgagctggacaaaaaaggtcgccag
aaaaaagtggccgacgagtctgtgtgggcgctgttgaaagatcatgtggcaccgcgcaag
gacgtgtctgatgaggaaatcaccgagcgcctgatggtctccctgtgtctggaagcggtt
cgctgcctggaagacggcattgtggattctgccaccgaactggatatggcactcatatac
ggcattggtttcccacccttcctgggcggcgccatccgttatatggagtccatgggcctg
gctaactttgtggccatcgccgacaaatacgcgcaccttggcggcttgtacaaggtgacc
gatcaactgcgcgccaaggcggaagccggccagagctacttcgcctaa

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