KEGG T00361: Sala

Sphingopyxis alaskensis: Sala_0176

Entry

Sala_0176 CDS T00361

Gene name

sucC

Definition

succinyl-CoA synthetase subunit beta

Orthology

K01903

succinyl-CoA synthetase beta subunit [EC:6.2.1.5]

Organism

sal Sphingopyxis alaskensis

Pathway

sal00020	Citrate cycle (TCA cycle)
sal00640	Propanoate metabolism
sal00660	C5-Branched dibasic acid metabolism
sal01100	Metabolic pathways
sal01110	Biosynthesis of secondary metabolites
sal01120	Microbial metabolism in diverse environments

Module

sal_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sal_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sal00020]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:sal00640]
Metabolism; Carbohydrate metabolism; C5-Branched dibasic acid metabolism [PATH:sal00660]

SSDB

Motif

Pfam:

ATP-grasp_2 Ligase_CoA ATP-grasp_5 ATP-grasp_4

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

179980..181260

AA seq 426 aa
MPRNLAYAAPNFSLFLESKGPADLMNIHEYQAKELLAKFGVAVPRGIAAMSVEEAVAAAK
QLPGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLARSIEEVGSHAREMLGNTLVTIQT
GEAGKQVNRLYITDGADIKKEYYLALLVDRASSRIAVVASTEGGMDIETVAHNTPDKIHT
ITIDPATGLMPHHGRSVAAALELTGDLAKQAAKVLAGLYDAFLATDAEQIEINPLAVCEG
ANGDELLVLDAKLGFDGNAMFRHPDIAELRDLTEEDPAEVEASEYDLAYIKLDGNIGCMV
NGAGLAMATMDIIKLNGAFPANFLDVGGGASKEKVTAAFKIILKDPAVEGILVNIFGGIM
KCDIIADGIVAAAKEVNLSVPLVVRLEGTNVQQGKDILANSGLPIVAANDLGDAAKKIVA
EVARAA

NT seq 1281 nt +upstreamnt +downstreamnt
ttgccgcgcaacttggcttatgcggcgccaaacttctccctcttcctagagtcgaaaggc
ccggcagacctcatgaacattcacgaatatcaggcgaaagaactgctcgcgaaatttggc
gtcgccgtgcccaggggcatcgccgcgatgagcgtcgaggaagctgtcgcggcggcgaag
cagctaccggggccgctctatgtcgtgaagtcacaaatccacgccggtggccgcggcaag
ggcaagttcaaggaactaggccccgacgcgaagggcggcgtccgtctcgccaggagcatc
gaggaagtcgggagccacgcgcgtgaaatgctcggcaacacgctggtgacgatccagacc
ggcgaagcgggcaagcaggtcaaccggctctacatcaccgacggcgccgacattaagaaa
gaatattatctcgcgctcctcgtcgatcgcgcgtcgagccgcatcgcggtggtcgcttcg
accgaaggcgggatggacatcgagaccgtcgcgcacaacacgccggacaagattcacacg
atcaccatcgaccccgcgaccgggctgatgccgcaccacggccgcagcgtcgccgccgcg
ctcgaactgaccggcgacctcgccaagcaggcggcgaaggtgctcgccgggctttacgac
gccttcctcgcgaccgacgccgaacagatcgagatcaacccgcttgccgtctgcgaaggc
gcgaacggcgacgaactgctcgtgctcgacgcgaagctcggcttcgacggcaacgcgatg
ttccgccaccccgatatcgccgaactgcgcgatctgaccgaagaagatccggccgaagtc
gaggcgtccgaatatgaccttgcctatatcaagctcgacggcaacatcggctgcatggtc
aatggtgcgggtctcgcgatggcgacgatggacatcatcaagctgaacggcgccttcccg
gcgaacttcctcgacgtcggcggcggcgcgagcaaggaaaaggtcaccgcggcgttcaag
atcatcctgaaagaccccgcggtcgagggcatcctcgtcaacatcttcggcggcatcatg
aagtgcgacatcatcgccgacggcatcgtcgccgcggcgaaggaagtgaacctgtcggtc
ccgctcgtcgttcgcctcgaaggcacgaacgtgcagcagggcaaggacattctcgcgaac
tcgggcctgccgatcgtggcggccaacgatctgggcgatgcggcgaaaaagatcgtcgcc
gaggttgcgagggcggcgtga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SAL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

Download RDF

DBGET integrated database retrieval system