KEGG   Sphingopyxis alaskensis: Sala_0422
Entry
Sala_0422         CDS       T00361                                 
Name
(GenBank) single-strand binding protein
  KO
K03111  single-strand DNA-binding protein
Organism
sal  Sphingopyxis alaskensis
Pathway
sal03030  DNA replication
sal03430  Mismatch repair
sal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sala_0422
   03430 Mismatch repair
    Sala_0422
   03440 Homologous recombination
    Sala_0422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sal03032]
    Sala_0422
   03400 DNA repair and recombination proteins [BR:sal03400]
    Sala_0422
   03029 Mitochondrial biogenesis [BR:sal03029]
    Sala_0422
DNA replication proteins [BR:sal03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Sala_0422
DNA repair and recombination proteins [BR:sal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     Sala_0422
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Sala_0422
Mitochondrial biogenesis [BR:sal03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    Sala_0422
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-ProteinID: ABF52143
UniProt: Q1GW29
Position
complement(428957..429379)
AA seq 140 aa
MDPECSIRRKPMTNLVILVGRIARDPETRTTQGGTSITSISVVTDRPARKDGKTYKDKNG
YTAKDSEFHRITCFNGLSQNVAKYCTKGQLVTVEGRIHYTQWEDQSGAKRYGCEIIADKV
DFLTKGRSGGNEGAPDIDED
NT seq 423 nt   +upstreamnt  +downstreamnt
atggacccggaatgctcgatcaggagaaagcccatgaccaatctcgttatcctcgttggc
cgtatcgctcgcgaccccgaaacccgcaccacccagggtggaaccagcatcacctcgatc
tcggtcgtgaccgatcggcccgcccgcaaggatggcaagacctacaaggacaaaaacggc
tacaccgccaaggacagcgaattccaccggatcacctgcttcaacggcctgagccagaac
gtcgccaagtattgcaccaagggccagctcgtgacggtcgaaggccgcatccactacacg
cagtgggaggatcagagcggcgccaagcgctacggctgcgagatcatcgccgacaaggtc
gacttcctcaccaagggccgttcgggcggcaacgagggagcacccgatatcgacgaggac
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (22)   

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