KEGG T00361: Sala

Sphingopyxis alaskensis: Sala_2228

Entry

Sala_2228 CDS T00361

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

sal Sphingopyxis alaskensis

Pathway

sal00020	Citrate cycle (TCA cycle)
sal00310	Lysine degradation
sal00380	Tryptophan metabolism
sal01100	Metabolic pathways
sal01110	Biosynthesis of secondary metabolites
sal01120	Microbial metabolism in diverse environments

Module

sal_M00009	Citrate cycle (TCA cycle, Krebs cycle)
sal_M00011	Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:sal00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:sal00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:sal00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(2339422..2342244)

AA seq 940 aa
MNLERQSFDLDEPQAGPSWAPKNWPLIDSDDLTAALDPQQMQVAVKAAAAKAGAPLSNAE
VERAANDSIRAMMLIRTYRVRGHLAARLDPLGLSERELPADLTPEYHGFVGADLDRPIWL
GGALGLEKGTVREIVAILQANYCGHVGLEYMHISDVEERRFLQDRMEGADKSVEFSQRGK
QAILSKVIEAEEWEKFLARKYVGTKRFGLDGGEAMIPAMEAIIKYGGQYGVKEIVYGMAH
RGRLNMLANVMAKPYQVIFHEFAGGSANPDDIGGSGDVKYHLGTSTDREFDGISVHMSLV
PNPSHLEAVDPVVLGKVRAQQVVRDDLVKHEQVLPVLIHGDAAFAGQGIVWECLGFSGIR
GYNTGGCIHFIVNNQIGFTTSPQFARSSPYPSDVAKGVQAPILHVNGDDPEAVTFACKLA
IDFRQQFKRDVVIDMWCYRRFGHNEGDEPSFTQPLMYERIRKHPPVSQLCAAKLEAEGVI
EPGWADARRAELVARLESDFEAAKSYKPNKADWFAGRWSGLYAPTDPENARRNIATGVTE
KLFDSIGRTLTTIPADVEVHKTLRRVIDARAAMFADKDDGEVFDWATAESLAFGTLLSEG
YQVRLSGQDSGRGTFSQRHAVWVDQKTEEKYIPLTSVPHGRFEVLDSPLSEYGVLGFEYG
YAMADPKSLVLWEAQFGDFANGAQIMIDQFIAAGEAKWLRANGLVMLLPHGYEGQGPEHS
SARLERFLQLCAGDNIQVCNISTPSNYFHVLRRQMLRSFRKPLIIMTPKSLLRHKLAVSR
RSDFIGDAHFRRIMSDRTPPADADIKRVVLCSGKVGYDLMEARDAADLTDTTVIRIEQLY
PFPGEALAVRLRRMPKLEDVVWAQEEPRNNGAWFFVGELIEEALAEAGKKGMRPRYAGRA
SAASPATGLMSRHQTEQSALVADALGLSVRAEIRRTKNKA

NT seq 2823 nt +upstreamnt +downstreamnt
atgaacctcgaacgacaaagcttcgacctcgacgagccgcaggccggcccgagctgggcg
ccgaagaactggccgctgatcgacagcgacgatctgaccgccgcgctcgacccgcagcag
atgcaggttgcggtcaaggccgcggcggcaaaggcgggcgcgccgttgtcgaatgccgag
gtcgagcgcgcggcgaatgattcgatccgcgccatgatgctgatccgcacctatcgcgtg
cgcgggcatctcgccgccaggctcgatccgctcgggctcagcgagcgcgaactgcccgcc
gacctgactcccgaatatcacggcttcgtcggtgccgacctcgaccggccgatctggctg
ggcggcgcgctggggctcgaaaaggggacggtgcgtgagatcgtcgcgattttgcaggcc
aattattgcggccatgtcggcctggaatatatgcatatttccgacgtcgaggaacggcgt
ttcctgcaagaccgcatggagggcgccgacaagagcgtcgagttcagccagcgtggcaag
caggccattctcagcaaggtgatcgaggccgaggaatgggagaagttcctcgcgcgcaaa
tatgtcggcaccaagcgcttcgggctcgacggcggcgaggcgatgatccccgcgatggaa
gccatcatcaaatatggcggccaatatggcgtgaaggaaatcgtctatggcatggcacac
cgcgggcggctcaacatgctcgcgaatgtcatggcgaagccctatcaggtcatcttccac
gaatttgccggcggcagcgccaatcccgacgacatcggcgggtcgggcgacgtcaaatat
cacctcggcacctcgaccgaccgcgagttcgacgggatttcggtgcatatgtcgctcgtg
cccaacccctcgcacctcgaggcggtcgatccggtcgtgctcggcaaggtgcgcgcgcag
caggttgtgcgcgacgacctcgtcaagcatgagcaggtgctgccggtgctcatccacggc
gacgccgccttcgcagggcaggggatcgtctgggaatgcctcggtttttcggggattcgc
ggttataataccggcggctgtatccatttcatcgtcaataaccagatcggtttcacgaca
agtccgcaattcgccagatcgtccccctatccgtccgacgtggcaaagggtgtgcaggcg
ccgattctgcacgtcaacggcgacgatcccgaggcggtgacctttgcgtgcaagctcgcg
atcgatttccgccagcagttcaagcgcgacgtcgtgatcgacatgtggtgctatcgccgc
ttcggccataatgagggcgacgaaccctcgttcacccagccgctgatgtacgaacgcatc
cgcaagcacccgccggtgtcgcagctgtgcgccgcgaagctggaggccgaaggcgtgatc
gagccgggctgggccgacgcgcgccgcgccgaactggtcgcgcggctggaaagcgatttc
gaggcggccaaaagctacaagccgaacaaggccgactggttcgccgggcgctggtcgggg
ctctatgcgccgaccgaccccgaaaatgcgcgccgcaacatcgcgacgggcgtgaccgaa
aagctgttcgattcgatcggccgcacgctgaccacgatccccgccgatgtcgaggttcac
aagacgctgcgccgcgtcatcgacgcgcgcgccgcgatgttcgctgacaaggatgatggc
gaggtgttcgactgggcgaccgccgaaagccttgctttcggcaccctgctcagcgagggc
tatcaggtgcgcctgtcgggccaggattcgggccgcggcaccttcagccagcgtcacgcg
gtctgggtcgaccagaagaccgaggaaaaatatatcccgctgaccagcgtgccgcacggt
cggttcgaggtgctcgacagtcccttgagcgaatatggcgtgctcggtttcgaatatggc
tatgcgatggccgacccgaaatcgcttgtgttgtgggaagcgcagttcggtgactttgcc
aacggcgcgcagatcatgatcgaccagttcatcgcggcgggcgaagccaagtggctgcgc
gccaacgggctcgtgatgctgctcccccacggctatgaagggcagggccccgaacatagc
tcggcgcgcctcgaacgcttcctgcaattatgcgcgggtgacaatatccaggtgtgcaat
atctcgacgccgtcgaactattttcatgtcctgcgtcgccagatgctgcgctcgttccgc
aagccgctcatcatcatgacgcccaagtcgctgctgcggcacaagcttgcggtgtcgcgg
cgcagcgacttcatcggcgacgcgcatttccgccgcatcatgtccgaccgcacgccgccc
gccgatgccgacatcaagcgtgtcgtgctctgttcgggcaaggtcgggtacgacctgatg
gaggcgcgcgatgccgccgacctcaccgatacgacggtgatccgcatcgagcagctctat
ccctttcccggcgaggcgctcgcggtgcggctgaggcggatgccgaagctggaggatgtc
gtgtgggcgcaggaagagccgcgcaacaacggcgcctggttcttcgtgggcgaactgatc
gaggaagcgctggccgaagcgggcaagaagggcatgcgcccgcgctatgccggccgcgcc
tccgcagcatcgcccgcgaccggcctgatgagccgccaccagaccgaacagtcggcgctg
gtcgccgatgcgctcggcctgtcggttcgcgccgaaatccgccgcaccaagaacaaagcc
tga

All links

Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-SAL (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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