KEGG   Streptomyces albus: XNR_0333Help
Entry
XNR_0333          CDS       T02545                                 

Definition
DNA polymerase LigD, polymerase domain-containing protein
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
salb  Streptomyces albus
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:salb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    XNR_0333
   03420 Nucleotide excision repair
    XNR_0333
   03430 Mismatch repair
    XNR_0333
   03450 Non-homologous end-joining
    XNR_0333
Enzymes [BR:salb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     XNR_0333
DNA repair and recombination proteins [BR:salb03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      XNR_0333
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(403297..404316)
Genome map
AA seq 339 aa AA seqDB search
MGSEAVQLEVDGHSVRLSHPDKVWFPERGFTKLDVAQYFLAVQGGVTRALRRRPTTLQRF
PDGVDGEFFYQKRAPKNKPDWLDTARISFPSGRHADEICPDSPAAVLWAVNLGCLTFHPW
PVRAPDTEHPDELRVDLDPQPGTDFRDAVAAAQTLREILDEYGLRGWPKTSGGRGLHVFI
PIEPVEPFVEVRRAAIALAREIERRMPERVTTAWWKEERGERIFVDYNQTARDRTIAGAY
SVRGKPHAPVSAPLRWDELDDADPRDFDLLTMQARYAALGDVHADIDDHAYRLDPLLELA
ARDAAEHGLEDLPYPPDHPKMPGEPRRVQPSRARRDSGD
NT seq 1020 nt NT seq  +upstreamnt  +downstreamnt
atgggatcggaagcggtgcaactcgaggtcgacgggcacagcgtgcggctctcccacccg
gacaaggtgtggttccccgagcgcggcttcaccaagctggacgtcgcccagtacttcctc
gccgtccagggcggcgtcacccgcgccctgcgccggcggcccaccaccctccagcgcttc
cccgacggcgtggacggcgagttcttctaccagaagcgcgcgccgaagaacaagcccgac
tggctcgacaccgcccgcatctccttccccagcggccgccacgccgacgagatctgcccc
gactccccggccgccgtcctgtgggccgtcaacctcggctgcctcaccttccacccctgg
ccggtgcgggccccggacaccgagcaccccgacgagctgcgcgtcgacctcgacccgcag
cccggcacggacttccgcgacgccgtcgccgccgcccagaccctgcgcgagatcctcgac
gagtacggcctgcgcggctggcccaagacctccggcgggcgaggcctgcacgtcttcatc
ccgatcgagccggtcgagcccttcgtggaggtccgcagggccgccatcgcgctggcccgc
gagatcgagcgccgtatgcccgagcgggtcaccacggcctggtggaaggaggagcgcggc
gagcgcatcttcgtcgactacaaccagaccgcccgcgaccgcaccatcgccggtgcctac
tccgtccgcggcaagccccacgccccggtctccgccccgctgcgctgggacgaactggac
gacgccgacccccgcgacttcgacctcctcaccatgcaggcccgctacgccgccctcggc
gacgtgcacgccgacatcgacgaccacgcctaccgcctcgaccccctcctggaactggcc
gcccgcgacgcggccgaacacggcctggaggacctgccctacccgccggaccaccccaag
atgccgggcgaaccccgccgcgtacagccgagcagggcccgccgcgactccggagactga

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