KEGG   Streptomyces albidoflavus: XNR_3540
Entry
XNR_3540          CDS       T02545                                 
Name
(GenBank) Lysyl-tRNA synthetase (class I)
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
salb  Streptomyces albidoflavus
Pathway
salb00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:salb00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    XNR_3540
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:salb01007]
    XNR_3540
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:salb03016]
    XNR_3540
Enzymes [BR:salb01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     XNR_3540
Amino acid related enzymes [BR:salb01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   XNR_3540
Transfer RNA biogenesis [BR:salb03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    XNR_3540
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g
Other DBs
NCBI-ProteinID: AGI89879
Position
4059116..4060903
AA seq 595 aa
MRKKDVPIVAQSTETADWVSRYADEVIAEAERRAGAKKADGTADGAPGTDGLTVVVASGL
SPSGPIHLGNLREVMTPHLVADEVRRRGHTVRHLISWDDYDRYRKVPAGVAGIDESWAEH
IGKPLTAVPAPAGSAYPNWAEHFKAAMTEALDALGVEYDGISQTTQYTSGAYREQILHAM
RHRGDIDAILAQYRTKKAPGKKSQKPVDEAELEAAEGSGAAAEDDGTTAGGGYYPYKPYC
TVCNKDLTTVTSYDDETTELAYTCACGHAETVKLSTFDHGKLVWKVDWPMRWAYEGVIFE
PSGVDHSSPGSSFQVGGQIVEIFDGVRPIGPMYAFVGISGMAKMSSSKGGVPTPADALKI
MEPQLLRWLYARRRPNQSFKIAFDQEIQRLYDEWDKLEAKVAEGAALPADAAAHSRAAAT
AAGELPRTPRPLPYRTLASVADITAGAEDQTLRILSELDPAHPITGLDEVRPRLDRAEAW
INTYVDAEARTVVRAEPDTEALAGLGDEARESLRLLLDGLDSHWSLDGLTTLVYGVPKIQ
AGFPADAKPTPELKAAQRSFFALLYQLLVGRDTGPRLPTLLLAVGEDRVRRLLGA
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgagaaagaaggacgtgccgatcgtggctcagagcacagagaccgccgactgggtctcc
cgttacgcggacgaggtcatcgccgaggcggagcgacgagccggtgccaaaaaggccgac
ggcacggcggacggggcacccggcacggacggcctgaccgtggtcgtcgcctccggactc
tccccttccggccccatccacctgggcaacctccgcgaggtcatgaccccgcacctggtc
gccgacgaggtccgccgccgcggccacaccgtgcgccacctcatctcctgggacgactac
gaccggtaccgcaaggtcccggccggcgtcgcgggcatcgacgagagctgggccgagcac
atcggcaagccgctcaccgccgtccccgccccggccggctcggcctacccgaactgggcc
gagcacttcaaggccgccatgaccgaggcgctggacgcgctcggcgtggagtacgacggg
atcagccagaccacccagtacacctcgggcgcctaccgcgagcagatcctgcacgccatg
cgccaccgcggcgacatcgacgcgatcctcgcccagtaccgcaccaagaaggcccccggc
aagaagtcgcagaagccggtggacgaggccgagctggaggccgccgagggctccggcgcc
gccgccgaggacgacggcacgacggcgggcggcggctactacccgtacaagccgtactgc
accgtctgcaacaaggacctcaccaccgtcacctcgtacgacgacgagacgacggagctg
gcctacacctgcgcctgcggccacgccgagacggtcaagctctccaccttcgaccacggc
aagctggtctggaaggtcgactggccgatgcgctgggcctacgagggcgtgatcttcgag
ccctccggcgtcgaccactcctcgcccggctcctccttccaggtcggcggccagatcgtg
gagatcttcgacggcgtccggccgatcggcccgatgtacgccttcgtcggcatctccggc
atggcgaagatgtcctcctccaagggcggtgtgccgaccccggccgacgccctgaagatc
atggagccccagctcctccgctggctctacgcccgccgccgccccaaccagtccttcaag
atcgccttcgaccaggagatccagcggctctacgacgagtgggacaagctggaggccaag
gtcgccgagggcgccgcgctgcccgccgacgccgccgcccacagccgcgccgccgccacc
gccgccggtgaactgccgcgcaccccgcgcccgctgccgtaccgcacgctcgcctcggtc
gccgacatcaccgccggtgccgaggaccagaccctgcgcatcctcagcgagctggacccg
gcccacccgatcaccggcctggacgaggtccgcccccggctcgaccgcgccgaggcgtgg
atcaacacctacgtcgacgccgaggcccgcaccgtcgtccgcgccgagcccgacaccgag
gcgctggccggcctcggcgacgaggcgcgcgagtcgctgcgcctcctcctcgacggcctc
gacagccactggtccctcgacgggctgaccaccctggtctacggcgtgccgaagatccag
gccggtttccccgccgacgccaagccgacccccgagctgaaggcggcccagcgcagcttc
ttcgccctgctctaccagctcctcgtcggccgcgacaccggcccgcgcctgcccaccctg
ctgctcgccgtcggcgaggaccgggtccgccgcctgctgggcgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system