KEGG   Streptomyces noursei ZPM: SAZ_36920
Entry
SAZ_36920         CDS       T03896                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
sall  Streptomyces noursei ZPM
Pathway
sall03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SAZ_36920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sall03400]
    SAZ_36920
Enzymes [BR:sall01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAZ_36920
DNA repair and recombination proteins [BR:sall03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SAZ_36920
SSDB
Motif
Pfam: LigD_Prim-Pol NAD_binding_2
Other DBs
NCBI-ProteinID: AKA07363
Position
8393933..8394838
AA seq 301 aa
MSPITVVEGRRLSLTNLDKVLYPETGTTKGEVLHYCTTTADVLLPHLHDRPVSFLRYPDG
PDGQRFFTKNVPPGAPSWVKSCEVPHSRSGPARQVLLQDLASLVWAANLVVELHTPQWTC
GAPGVADRLVFDLDPGAPATIVECCTAARWLRDRLAADGLDAYAKTSGSKGLHLVVPIEP
TPADRTTAYARTLAVEAGVALGELVTHKMTRALRPGKVFIDFSQNAAAKTTATAYTLRAR
PLPTVSTPVTWDEVAACTQPGQLTFLFGEIAGRRARYGDLHAPLLGAERARPVPRGARRS
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcgccgatcaccgtcgtggaggggcggcgcctctcgctgacgaacctggacaaggtc
ctctatcccgagaccggcaccaccaagggtgaggtgctgcactactgcaccaccaccgcg
gacgtgctgctcccgcacctccacgaccgtccggtgtccttcctgcgctaccccgacggg
ccggacggccagcgcttcttcaccaagaacgtgccgcccggcgcgccctcctgggtgaag
agctgcgaggtaccccattcgaggtcggggccggcccggcaggtgctcctccaggacctc
gcctcgctggtctgggccgccaacctcgtcgtcgaactgcacaccccgcaatggacctgc
ggcgcgccgggcgtggccgaccgactggtcttcgacctggatccgggcgcccccgccacc
atcgtggagtgctgcaccgccgcccggtggttgcgcgaccggttggcggcggacggcctc
gacgcctacgccaagaccagcggctccaaggggctgcacctcgtcgtgcccatcgagccc
acccccgccgaccgcaccaccgcctacgcccgtacgctggcggtcgaggccggcgtcgcc
ctcggcgagctggtcacgcacaagatgacccgggcgctgcggccgggcaaggtcttcatc
gacttctcgcagaacgccgcggccaagaccaccgcgaccgcctacacgctgcgggcccgc
cccctgccgaccgtgtccacccccgtcacctgggacgaggtcgccgcctgcacccagccg
ggccaactcaccttcctcttcggcgagatcgccggtcgccgcgcgcgctacggggacctg
cacgcaccactgctcggcgcagaacgtgcccgcccggtaccgcgcggcgcccgccggtcc
gcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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