KEGG   Streptomyces noursei NK660: DC74_5619
Entry
DC74_5619         CDS       T03082                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
salu  Streptomyces noursei NK660
Pathway
salu03030  DNA replication
salu03410  Base excision repair
salu03420  Nucleotide excision repair
salu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:salu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DC74_5619
   03410 Base excision repair
    DC74_5619
   03420 Nucleotide excision repair
    DC74_5619
   03430 Mismatch repair
    DC74_5619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:salu03032]
    DC74_5619
   03400 DNA repair and recombination proteins [BR:salu03400]
    DC74_5619
Enzymes [BR:salu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     DC74_5619
DNA replication proteins [BR:salu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DC74_5619
DNA repair and recombination proteins [BR:salu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     DC74_5619
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DC74_5619
   MMR (mismatch excision repair)
    DNA ligase
     DC74_5619
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      DC74_5619
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH
Other DBs
NCBI-ProteinID: AIA06073
Position
6407982..6410198
AA seq 738 aa
MAGEQHAAASEVPAAAREEHAQLAEQIEEHRFRYYVKDAPVVSDAEFDKLLRALEALEET
HPGLRTPDSPTQKVAGSYATEFTEVAHRERMLSLDNAFDDEELSAWAERIAGELGGDPKG
AGYHFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLTGDRVP
ALVEVRGEVYFPMEKFLELNERLVADGKPPFANPRNAAAGSLRQKDPKVTATRPLHMVVH
GLGARDGLEIDRLSEAYDLLQEWGLPTASHNRVVDSLAAVREFIAHYGDPETRRTAVEHE
IDGVVVKLDEIRLQGRLGATSRAPRWAIAWKYPPEEVNTKLVDVRVGVGRTGRVTPYAVV
EPITVAGSEVEFATLHNQDVVKAKGVLIGDTVVIRKAGDVIPEILGPVVDLRDGTEREFV
MPAECPECGSALQPAKEGDIDLRCPNARSCPAQIRERLFYLAGRKCLDIENFGYVAATAL
SQPLEPAEPPLTDEGGLFDLSVERLLPIKSHVLDPDTGLPKRDPKTGEEKVVTFFANQKG
EPKKNTLAMLENIQAAKERPLARILTGLSIRHVGPVAAQALAREFRSIDRIRDASEEELA
AVDGVGGTIAASLKQWFAVDWHQEIIERWRAAGVRMEEEQTGDAGPRPLEGVTVVVTGTL
QSHTRDGAKEALQALGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQLKVPVLDDDGFAVLL
EQGPEAARAVAVTPPEEE
NT seq 2217 nt   +upstreamnt  +downstreamnt
gtggctggcgaacagcacgcagcggcatccgaggtgcccgccgcggcacgggaggagcac
gcgcagctcgctgagcagatcgaggagcaccgcttccgctactacgtgaaggacgccccg
gtcgtcagcgacgcggagttcgacaagctgctgcgcgccctggaggccctggaggagacc
catcccgggctgcgcacgccggactcgccgacccagaaggtcgccggctcctacgccacg
gagttcaccgaggtcgcgcaccgcgagcggatgctctcgctggacaacgccttcgacgac
gaggagctgtcggcctgggccgagcggatcgccggcgaactgggcggcgacccgaagggc
gccggctaccacttcctgtgcgagctgaaggtcgacggcctcgcggtcaacctcacctac
gagcacggccggctcacccgcgccgccacccgcggcgacggccgcaccggcgaggacatc
acgcccaacgtccgcaccatcgccgagatcccgcaccgcctcaccggcgaccgggtcccc
gcactcgtcgaggtccgcggggaggtctacttcccgatggagaagttcctggagctcaac
gagcgcctggtggccgacggcaagcccccgttcgccaacccccgcaacgccgcggccggt
tcgctgcgccagaaggaccccaaggtcaccgccacccgcccgctgcacatggtcgtgcac
ggcctcggcgcccgcgacggcctggagatcgaccgcctctccgaggcgtacgacctgctc
caggagtggggcctgcccaccgcttcgcacaaccgcgtcgtcgactcgctcgccgcggtg
cgggagttcatcgcccactacggcgaccccgagacccgccgcaccgccgtcgagcacgag
atcgacggcgtcgtggtcaagctcgacgagatccggctccagggccggctgggcgccacc
tcgcgggcgccgcgctgggcgatcgcctggaagtacccaccggaggaggtcaacaccaag
ctggtggacgtccgcgtcggcgtcggccgcaccggccgggtcacgccgtacgcggtcgtc
gaaccgatcaccgtcgccgggtccgaggtggagttcgccaccctgcacaaccaggacgtg
gtcaaggccaagggcgtcctcatcggggacaccgtcgtcatccgcaaggccggcgacgtc
atcccggagatcctgggcccggtggtggacctgcgggacggcaccgagcgggagttcgtg
atgcccgccgagtgccccgagtgcggatcggcgctccagcccgccaaggaaggcgacatc
gacctgcggtgtcccaacgcccggtcctgccccgcccagatccgcgagcggctgttctac
ctcgccggccgcaagtgcctcgacatcgagaacttcggctacgtcgccgccaccgcgctc
agccagcccctggagcccgccgagccgccgttgacggacgagggcggcctcttcgacctc
tccgtcgagcggttgctgcccatcaagtcccacgtcctggacccggacaccggtctgccc
aagcgcgatccgaagaccggtgaggagaaggtcgtcaccttcttcgccaaccagaagggc
gagccgaagaagaacaccctcgccatgttggagaacatccaggccgccaaggagcgcccg
ctggcccggatcctcaccggcctgtcgatccgtcacgtgggcccggtcgcggcgcaggcg
ctggcccgcgagttccgctccatcgaccggatccgggacgccagcgaggaggaactggcc
gccgtggacggcgtcggcggcaccatcgcggcgtcgctcaagcagtggttcgccgtggac
tggcaccaggagatcatcgagcgctggcgggccgcgggcgtccggatggaggaggagcag
acgggtgatgcgggcccgcgtccattggaaggcgtcaccgtcgtggtaacgggcacactt
cagtcacacacgagagatggcgcgaaagaagcgttgcaggctctcggagcgaaggtgacc
ggatccgtttccaagaagaccggattcgtagtggtgggcgacaaccccggttcgaagtac
gacaaagccatgcagttgaaggtccccgtgttggacgatgatggcttcgctgtgctgctg
gagcagggtcccgaggcagcacgagcggtagctgtcactccgcctgaggaggagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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