KEGG   Streptococcus agalactiae NEM316 (serotype III): rpoA
Entry
rpoA              CDS       T00104                                 
Name
(GenBank) RNA polymerase (alpha subunit)
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
san  Streptococcus agalactiae NEM316 (serotype III)
Pathway
san03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:san00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    rpoA
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:san03021]
    rpoA
   03400 DNA repair and recombination proteins [BR:san03400]
    rpoA
Enzymes [BR:san01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     rpoA
Transcription machinery [BR:san03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     rpoA
DNA repair and recombination proteins [BR:san03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      rpoA
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L Mg_chelatase_C
Other DBs
NCBI-ProteinID: CAD45729
UniProt: Q8CX32
Position
89502..90440
AA seq 312 aa
MIEFEKPIITKIDENKDYGRFVIEPLERGYGTTLGNSLRRVLLSSLPGAAVTSIKIDGVL
HEFDTIPGVREDVMQIILNVKGLAVKSYVEDEKIIELDVEGPAEITAGDILTDSDIEIVN
PDHYLFTIAEGHSLKATMTVAKNRGYVPAEGNKKDDAPVGTLAVDSIYTPVKKVNYQVEP
ARVGSNDGFDKLTIEIMTNGTIIPEDALGLSARVLIEHLNLFTDLTEVAKATEVMKETEK
VNDEKVLDRTIEELDLSVRSYNCLKRAGINTVFDLTEKTEPEMMKVRNLGRKSLEEVKIK
LADLGLGLKNDK
NT seq 939 nt   +upstreamnt  +downstreamnt
atgattgagtttgaaaaaccaataataacaaaaattgatgaaaataaagattacggcaga
tttgtcatcgaaccactagaacgtggctacggtacaactctaggaaactctcttcgtcgt
gtgcttctgtcttcacttccaggtgcagcagtcacatcaatcaaaattgatggagtatta
cacgaatttgatactatcccaggtgtacgtgaagatgtgatgcaaatcatccttaatgta
aaaggacttgctgtgaaatcttacgtcgaagacgaaaagattatcgaactagacgttgaa
ggtcctgcagaaattactgccggagatattttaacagatagtgatatcgaaattgtaaac
cctgaccattatcttttcacaattgctgaaggtcacagtttgaaagcaacaatgacagtt
gctaaaaaccgaggttatgttccagcagaaggaaataaaaaagatgatgcaccagtggga
acattggctgtagattcaatctatacaccagtgaaaaaagttaattatcaagttgaacct
gctcgtgtaggtagtaacgatggctttgataaattaactattgaaatcatgacaaatggc
acaatcattcctgaggatgctcttggtctttcagctcgcgtcttaattgaacacttaaac
ttgtttactgatttaacagaggttgctaaagcaactgaagtaatgaaggaaacagagaaa
gtgaacgatgagaaagtgcttgaccgcacaattgaggaacttgatttgtcagtgcgctca
tataactgtttaaaacgtgctggaattaatacagtatttgatttaacagaaaaaactgag
cctgaaatgatgaaagtccgaaacttaggacgtaagagtcttgaagaagttaaaatcaaa
cttgccgatctaggtcttggattaaaaaacgataaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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