KEGG   Streptococcus anginosus C238: SANR_1893
Entry
SANR_1893         CDS       T02829                                 
Name
(GenBank) metallo-beta-lactamase superfamily protein 1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sanc  Streptococcus anginosus C238
Pathway
sanc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sanc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SANR_1893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sanc03019]
    SANR_1893
Messenger RNA biogenesis [BR:sanc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SANR_1893
SSDB
Motif
Pfam: RNase_J_C Lactamase_B RMMBL Lactamase_B_2 DUF4453 Lactamase_B_6
Other DBs
NCBI-ProteinID: AGU84290
Position
2014435..2016117
AA seq 560 aa
MSYTLKPEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVENIDRIKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL
YEINQNTELQFKNLKATFFRTTHSIPEPFGIVIHTPQGKIVCTGDFKFDLTPVGEPADLH
RMAALGEDGVLALLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRLQ
QAAEAAVKTGRKIAVFGRSMEKAIANGIELGYIKAPKGTFIEPNEIKDYPAGEILIMCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGVPKDNIFIMSNG
DVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKSKM
ILAGPDILSRGFIYMRESGELIRHSQRILFNAIRIALKNKDASIQSVNGAIVNALRPFLY
ENTEREPIIIPMILTPDEEI
NT seq 1683 nt   +upstreamnt  +downstreamnt
atgtcatatactttaaaacccgaagaagtcggtgtatttgccattggtggtttaggagaa
atcggaaaaaatacctacgggattgaataccaagatgagattatcatcgttgatgcagga
attaaatttcctgaagacgacctcttagggattgattatgtcattcctgattattcttat
atcgtagaaaatattgaccgtatcaaaggagtgttgattactcacggtcacgaagaccac
atcggagggattcccttccttctcaagcaagcaaatgttcccatttatgctggaccactt
gcccttgcactgattcgtggtaaattggaagagcacggacttttacgtgatgctaaactc
tacgaaatcaatcaaaataccgaacttcaatttaaaaatttaaaagcaaccttcttccgt
accactcactccattccagaaccttttggaattgtcattcacacacctcaagggaaaata
gtatgtaccggtgattttaaattcgacttgacccccgttggagagcccgctgatttgcac
cgaatggctgccctcggtgaagatggcgttctagcattgctgtctgactcaaccaatgcg
gaaattccgaccttcacaaactctgaaaaagtcgttggacagtctatcatgaagatcatc
gaaggcattcatggacggattatctttgcctcttttgcctcaaatatcttccgcctccaa
caagctgcggaggctgctgttaaaactgggcgaaaaattgccgtttttggacgctcaatg
gaaaaagccatcgccaatggaattgaacttggctacatcaaggcgcctaaaggtactttc
atcgagccaaatgagattaaagactatcctgccggcgaaatacttatcatgtgtacagga
agccaaggagagccaatggcggctctttcacgcatcgccaatggaacacatcgtcaagta
cagcttcaaccaggtgatacagtgattttctcttctagtcctatcccaggaaatactact
agtgtcaataagcttatcaacaccatttcagaagcaggcgttgacgttatccatggcaaa
atcaataacatccatacatctgggcacggaggtcaacaagagcaaaaactcatgcttcgt
ttgataaaaccgaagtattttatgcccgtccatggtgaataccgtatgcaaaaagtgcat
gcgggacttgcaatggatactggagtgcctaaagacaatatctttatcatgagtaatgga
gatgttctagcgttaactgccaattctgctcgcattgctggaagtttcaacgcacaagat
atttatgtcgatggcaatcgtattggagaaattggtgctgcagtccttcgtgacagacgt
gacctttccgaagatggcgttgtccttgcagtagccactgttgactttaaatcgaagatg
atcttagccggtcctgatattctcagccgtggtttcatctatatgcgggaatcaggtgaa
ctgatccgtcatagccaacgtattcttttcaatgcgatacgtattgcattgaaaaataaa
gatgccagcatccagtctgtcaatggagctattgtaaatgctcttcggccatttttatat
gaaaatacagagcgtgagcccattatcatcccaatgattttaacaccagatgaagaaatc
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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